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. 2007 Aug 25;8:310. doi: 10.1186/1471-2105-8-310

Table 8.

Classification of the different types of protein-ligand atom contacts in three categories: less probable (0), probable (1) and very probable (2)

Ligand atom types Protein atom types

ACC NEG DON POS HDX ALP ARM
C_l 0 0 0 0 0 0 1
C_r 0 0 0 0 0 1 1

N_+ 1 2 0 0 0 0 0
N_d 2 2 0 0 1 0 0
N_a 0 0 1 0 0 0 0
N_r 2 0 0 0 0 0 1

O_a 0 0 1 1 0 0 0
O_- 0 0 1 2 2 0 0
O_h 0 2 1 0 0 0 0