TABLE 1.
Oligonucleotide primers used in this study
| Primers | Sequencea |
|---|---|
| lacI 5′ | gggggagctcCGTTATTTCTTGATGTCTCTGAC |
| lacI 3′ | ggggatccGCCTGGGGTGCCTAATGAGTGAG |
| lacA 5′ | ccggatccAATGACCGAAAGAATAAGAG |
| lacA 3′ | aaaactgcagATGTCTTTTGTGACGATACT |
| lacZ 5′ | ccggatccggtaccATGACCATGATTACGGATTCAC |
| lacZ 3′ | ccagatctCCTTACGCGAAATACGGGC |
| pSepL 5′ | cgggatccGATTGAGGCCTTGTTCAAGG |
| pSepL 3′ | cgggtaccTTCAATACCATTAGCCATTGG |
| lacI up 5′ | CGCGGTATGGCATGATAGCG |
| lacA down 3′ | CATGCCGGATGCGGCTAATG |
| lac mid 5′ | GTGACGTCTGCTTGCTGCAT |
| lac mid 3′ | CAGCAGGATATCCTGCACC |
| espA short 5′ | ccggatccCGATTGTCGAAGATAAAC |
| espA short 3′ | cggtgaccTGCATTTGATGTATCCAT |
| pgi probe 5′ | ACATCAATCCAACGCAGACC |
| pgi probe 3′ | TTCATCTTCTCCAGCACCGC |
| espA probe 5′ | ACATCCGTTGTTAATGTGAGTGCG |
| espA probe 3′ | GCAATTTTGGCATCCACAAG |
| sepL probe 5′ | ATCAAAACCCCGCATCTGTT |
| sepL probe 3′ | TTTCCTTGCGCTACCTTTGC |
| espD probe 5′ | GCTTAACGTAAATAACGATACCCTG |
| espD probe 3′ | CTCACCACTAATACCAAACAAT |
| escC probe 5′ | ATTCGCTAGATGCAGATTTTATCGG |
| escC probe 3′ | GTTACTTGATATTCAGGATGGC |
| lee1 5′ | ccggatccCTGTAACTCGAATTAAGTAGAG |
| lee1 3′ | ccggtaccGTATGGACTTGTTGTATGTGAATT |
| lee2 5′ | cgggatccGCGAACGCGCTCAATAATCTG |
| lee2 3′ | cgggtaccTGCTGCTTCCATTGATCTTTC |
| lee3 5′ | cgggatccCTGCTCGTCTCCGAGCATGCC |
| lee3 3′ | cgggtaccAACTAAAAGATTCATCTGCAGGCT |
| GFP 5′ | ccggatccggggtaccATGGTGAGCAAGGGCGAGGAGC |
| GFP 3′ | cgggtaccAACTAAAAGATTCATCTGCAGGCT |
The lowercase portions of some sequences are nonmatching sequence incorporating a restriction enzyme site.