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. 2007 Sep;177(1):549–556. doi: 10.1534/genetics.107.074336

TABLE 3.

Significant single-marker associations

Genotype term
Genotype-by-inversion term
Marker (allele) Location Trait Na Fa Pa a (SE)b Fa Pa a × inv (SE)c
Parents
DROABDB (274) 89E4 Wing size 803 22.35 2.69 × 10−6 9.35 (2.41) 2.39 0.1222 −2.68 (1.78)
DROABDB (282) 89E4 Wing size 803 9.93 0.0017 5.46 (1.53) 11.42 0.0008 5.46 (1.61)
DMU1951 (193) 95C4 Wing size 798 22.94 1.99 × 10−6 8.31 (1.73) 0.14 0.7113 0.76 (2.04)
DMTF125 (286) 95C9 Wing size 810 16.32 5.87 × 10−5 7.46 (2.32) 1.62 0.2037 −2.21 (1.79)
DMTF125 (301) 95C9 Wing size 810 3.47 0.0628 4.31 (1.66) 16.44 5.52 × 10−5 7.42 (1.83)
AC006414 (195) 89A1 Development time 804 2.21 0.1377 −8.26 (2.58) 15.73 7.98 × 10−5 12.33 (3.16)
Offspring
DROABDB (274) 89E4 Wing size 302 20.94 6.96 × 10−6 33.49 (9.10) 0.78 0.3774 8.49 (9.61)
DROLMALK (173) 98A14 Wing size 302 1.20 0.2750 −27.26 (7.70) 11.48 0.0008 39.96 (11.80)
a

The sample size (N) used in the ANOVA and the resulting F-statistic (F) and P-value (P). Values underlined are the significant terms. Statistical significance was determined using the permutation procedure developed by Churchill and Doerge (1994).

b

The genotype effect of an allele (a) and its SE.

c

The genotype-by-inversion effect of an allele (a × inv) and its SE.