TABLE 1.
Conserved loci mapped in H. melpomene and orthologs in B. mori
| Marker name | Abbreviation | H. melpomene linkage group | GenBank accession no. | B. mori linkage groupa | GenBank accession no. |
|---|---|---|---|---|---|
| Alanyl-tRNA synthetase | Aats-ala | 1 | EF207962 | 4 | M55993 |
| Dopa decarboxylaseb | DDC | 1 | AY437802 | 4 | AF372836 |
| Ribosomal protein L3b | RpL3 | 1 | EE743523 | 4 | AB024901 |
| Winglessc | Wg | 1 | AY745485 | 4 | D14169 |
| Ribosomal protein L6 | RpL6 | 2 | EF207960 | 16 | AY769273 |
| Ribosomal protein P2 | RpP2 | 2 | EF207959 | 16 | AY769269 |
| Glutathione S-transferase | GST | 3 | EF207961 | 6 | AJ006502 |
| Ribosomal protein L15d | RpL15 | 3 | DN172764 | 6 | AY769285 |
| Mannose–phosphate isomerasec | MPI | 3 | AY332460 | — | — |
| Ribosomal protein S6 | RpS6 | 4 | EF207950 | 21 | AY769320 |
| Ribosomal protein S15 | RpS15 | 4 | EF207951 | 21 | AY706957 |
| Ribosomal protein S17 | RpS17 | 4 | EF207952 | 21 | AY769333 |
| Ribosomal protein L11b | RpL11 | 5 | CO729501 | 3 | AY769280 |
| Ribosomal protein L13A | RpL13A | 5 | EF207949 | 3 | AY769283 |
| Ecdysteroid-inducible angiotensin-converting enzyme-related gene product | Ance | 6 | EF207953 | 9 | AB026110 |
| Ribosomal protein S14d | RpS14 | 6 | CX700812 | 9 | AY706956 |
| Engrailed | eng | 7 | AY745328 | 2 | M64335 |
| Invectedc | Inv | 7 | DQ445457 | 2 | M64336 |
| Ribosomal protein S21 | RpS21 | 7 | DN172654, CX700448 | 2 | AY578154 |
| Ribosomal protein S28 | RpS28 | 7 | EF452418 | 2 | AY583363 |
| Ribosomal protein L14 | RpL14 | 7 | EF207954 | 11 | AY769284 |
| Ribosomal protein L18 | RpL18 | 7 | EF207955, EF211970 | 11 | AY769287 |
| Ribosomal Sop2 | Sop2 | 7 | DT663968, EF211973 | 11 | AY763110 |
| Distal lessc | Dll | 7 | DQ445415 | — | — |
| Mitotic checkpoint control protein (bub3) gene | Bub3 | 7 | CX700513 | — | — |
| Polycomb protein Su(z)12 | Su(z)12 | 7 | DT662097 | — | — |
| Ribosomal protein S25 | RpS25 | 8 | EF207956 | 25 | AY769340 |
| chiB (chitinase precursor) | Cht | 9 | CX700556, EF211966 | 7 | AF052914 |
| Ribonuclease L inhibitor homolog | RLI | 9 | EF207958 | 7 | AB164193 |
| Ribosomal protein S27 | RpS27 | 9 | EF207957 | 7 | AY769342 |
| Cyclin-dependent kinases regulatory subunit | Cks | 9 | CX700558 | — | — |
| Elongation factor 1αb | Ef1a | 10 | AY747994 | 5 | D13338 |
| Elongation factor 1δ | Ef1d | 10 | CX700886 | 5 | AB046366 |
| Patchedb | Ptc | 10 | AY745373 | 5 | AADK01000387 |
| Ribosomal protein L13d | RpL13 | 10 | CO729603 | 5 | AY769282 |
| Ribosomal protein L19b | RpL19 | 10 | CX700796 | 5 | AY769289 |
| Ribosomal protein S11d | RpS11 | 10 | CX700450 | P | AY706955 |
| Opsin1b | OPS1 | 11 | AF126751 | 15 | AB047924 |
| Ribosomal protein L5b | RpL5 | 11 | CO729889 | 15 | AY769272 |
| Ribosomal protein L7A | RpL7A | 11 | EF207963 | 15 | AY769275 |
| Ribosomal protein L10Ab | RpL10A | 11 | CO729740 | 15 | AY769279 |
| Ribosomal protein P0b | RpP0 | 11 | CO729821 | 15 | AJ457827 |
| Ribosomal protein S5b | RpS5 | 11 | CO729660 | 15 | AY769319 |
| Ribosomal protein S8b | RpS8 | 11 | CX700851 | 15 | AY769322 |
| Ribosomal protein L8 | RpL8 | 11 | EF207977, EF211969 | — | — |
| Ribosomal protein L30d | RpL30 | 11 | CO729949 | — | — |
| Glycine-rich protein | GRP | 12 | EF207964, EF211967 | 8 | AB197877 |
| Beta-tubulin | Btub | 12 | EF207965, EF211964 | 20 | AB003287 |
| Ribosomal protein S7 | RpS7 | 12 | EF207966 | 20 | AY769321 |
| Ribosomal protein S20 | RpS20 | 12 | CX700684 | 20 | AY769336 |
| Enolase | Eno | 12 | EF207979 | — | — |
| Ribosomal protein L7d | RpL7 | 12 | CX700625 | — | — |
| Ribosomal protein L27 | RpL27 | 12 | EF207978 | — | — |
| Ribosomal protein S12d | RpS12 | 12 | CX700631 | — | — |
| Ribosomal protein S16 | RpS16 | 13 | EF207967 | 14 | AY769332 |
| Calreticulin | Crc | 13 | EF207968 | 22 | AB090887 |
| Cuticle protein (EDG84A homolog) | EDG84A | 13 | CO729743 | 22 | AB017550 |
| PCNA | PCNA | 13 | CV526328 | 22 | AB002264, AB002265 |
| Ribosomal protein L37 | RpL37 | 13 | DN172717 | 22 | AY769308 |
| Ribosomal protein S4 | RpS4 | 13 | CO729938 | — | — |
| Vermillionb | v | 13 | AY691422 | — | — |
| Ribosomal protein L12 | RpL12 | 14 | EF207969 | 19 | AY769281 |
| Eukaryotic translation elongation factor 2 | eEF2 | 14 | CX700527 | — | — |
| Ribosomal protein S9c | RpS9 | 14 | CX700565 | — | — |
| Ribosomal protein L22c | RpL22 | 15 | CX700470 | 17 | AY769291 |
| Ribosomal protein P40c | RpP40 | 15 | CX700776 | 17 | AB062685 |
| Ribosomal protein S24 | RpS24 | 15 | EF207970, EF211972 | 17 | AY578155 |
| Eukaryotic initiation factor 3B | eiF3B | 15 | EF207980 | — | — |
| Forkhead box J1c | Fox | 15 | CR974474 | — | — |
| Rab geranygeranyl transferasec | GerTra | 15 | CR974474 | — | — |
| Elongation factor 1γ | Ef1g | 16 | EF207971 | 18 | AB046361 |
| Heat shock protein hsp21.4 | Hsp21.4 | 17 | EF207972 | 13 | AB195972 |
| Lim protein | Mlp | 17 | DT663321 | 13 | AY461436 |
| Ribosomal protein L21 | RpL21 | 17 | CO729978 | 13 | AY769290 |
| Ribosomal protein L31c | RpL31 | 17 | CX700740 | 13 | AY769301 |
| ADP/ATP translocase | ANT | 17 | EF207974, EF211962 | 24 | AY227000 |
| Ribosomal protein L32 | RpL32 | 17 | EF207973 | 24 | AB048205 |
| Sui1 | Sui1 | 17 | CO729706, EF211974 | 24 | AY426343 |
| Ribosomal protein L27a | RpL27a | 17 | EF207981 | — | — |
| Ribosomal protein S10 | RpS10 | 17 | EF207982 | — | — |
| Scallopedc | Sd | 17 | DQ674429 | — | — |
| Bm44 | Bm44 | 18 | DT664299 | 23 | AB158647 |
| Inhibitor of Apoptosis protein | IAP | 18 | CV526245, EF211968 | 23 | AF281073 |
| Ribosomal protein S30 | RpS30 | 18 | CX700724 | 23 | AY769346 |
| Cubitus interruptusb | ci | 18 | AY429297 | U | AF529422 |
| 90-kDa heat-shock protein | 90hsp | 18 | CO729719, EF211960 | U | AB060275 |
| α-Tubulin | atub | 18 | EF207983, EF211963 | — | — |
| O-Glycosyltransferased | Ogt | 18 | CV526007 | — | — |
| Decapentaplegicb | Dpp | 19 | AY747899 | 12 | BAAB01102755 |
| J-domain-containing protein | JDP | 19 | DT662955 | 12 | AF176014 |
| Ribosomal protein L9 | RpL9 | 19 | EF207975 | 12 | AY769277 |
| Muscular protein 20 | Mp20 | 19 | CO729543 | — | — |
| Prophenol oxidase-activating enzyme precursor | PPAE | 19 | CO729777 | — | — |
| Ribosomal protein L44c | RpL44 | 19 | CX700847 | — | — |
| Caspase-1 | caspase | 20 | EF207976, EF211965 | 10 | AF448494 |
| Cytosolic juvenile hormone binding protein | Jhbp | 20 | DT661817 | 10 | AF098303 |
| Actin 1 | Act | 20 | EF207985, EF211961 | — | — |
| Calcium ATPase | Ca-P | 20 | CO729824 | — | — |
| Ribosomal protein L23A | RpL23A | 20 | EF207984, EF211971 | — | — |
| Apterousb | apt | 21 (Z) | AY747887 | 1(Z) | AB024903 |
| Triose–phosphate isomeraseb | TPI | 21 (Z) | AY548151 | 1(Z) | AY734490 |
a
Previously appeared in Yasukochi et al. (2006).
b
Previously appeared in Jiggins et al. (2005).
c
Previously appeared in Joron et al. (2006b).
d
Previously appeared in Papanicolaou et al. (2005).