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. Author manuscript; available in PMC: 2007 Oct 10.
Published in final edited form as: J Mol Biol. 2005 Sep 23;352(3):621–628. doi: 10.1016/j.jmb.2005.07.020

Table 1.

Primers used in this study

Primer name Sequencea Use
lacZ D201X ATCTGGAAGATCAGNNKATGTGGCGGATGA PCR 1: randomize D201
lacZ D201X rev TCATCCGCCACATMNNCTGATCTTCCAGATA PCR 4: randomize D201
lacZ H540X TTGCGAATACGCCNNKGCGATGGGTAACA PCR 2: randomize H540
lacZ H540X rev TGTTACCCATCGCMNNGGCGTATTCGCAAAG PCR 1: randomize H540
lacZ N604X CCAGTTCTGTATGNNKGGTCTGGTCTTTG PCR 3: randomize N604
lacZ N604X rev CAAAGACCAGACCMNNCATACAGAACAGGC PCR 2: randomize N604, adds Q600L mutation
3′ pET3 Phosphate-GTCGACGTTGGAGTCCACGTTCTTTAATA PCR 3 and 5: amplify whole plasmid
3′ pETout2 Phosphate-GCATGCCGTAAAGCACTAAATCGGAACC PCR 4 and 5: amplify whole plasmid
lacZ 454 rev CGACCCAGCGCCCGTTGCACCACAG lacZ sequencing
lacZ 377 AATCCGACGGGTTGTTACTCGCTCAC lacZ sequencing
lacZ 770 GAGTTGCGTGACTACCTACGGGTAAC lacZ sequencing
lacZ 1154 CTGAACGGCAAGCCGTTGCTGATTC lacZ sequencing
lacZ 1536 CGCGTGGATGAAGACCAGCCCTTC lacZ sequencing
lacZ 1920 CGGGCAAACCATCGAAGTGACCAGC lacZ sequencing
lacZ 2269 CATCGAGCTGGGTAATAAGCGTTGGC lacZ sequencing
lacZ 2679 TGCCAGCTGGCGCAGGTAGCAGAG lacZ sequencing
a

K = G or T; M = C or A.