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. 2007 Aug 17;35(16):5511–5519. doi: 10.1093/nar/gkm547

Table 1.

Primers

Sequence
shRNA primer
pSUPER-β-catenin 5′GATCCCGTGGGTGGTATAGAGGCTC TTCAAGAGAGAGCCTCTATACCACC CACTTTTTGGAAA-3′
5′AGCTTTTCCAAAAAGTGGGTGGTAT AGAGGCTCTCTCTTGAAGAGCCTCT ATACCACCCACGG-3′
pSUPER-p5O 5′GATCCCTATTAGAGCAACCTAAACA TTCAAGAGATGTTTAGGTTGCTCT AATATTTTTGGAAA-3′
5′AGCTTTTCCAAAAATATTAGAGCA ACCTAAACATCTCTTGAATGTTTA GGTTGCTCTAATAGG-3′
RT-PCR primer
Forward 5′-CCTATGTATCCCTCAAAGCA-3′
Reverse 5′-CCCACAGTGTATCCCTTCTT-3′
Luciferase primer
12-1 F 5′-TACTCTCATTCTATCATTATTCCAA-3′
12-2 F 3′-ATAACCTCTTTACGCCTCAGT-3′
12-2 R 5′-CTTCTATGCTTACAAATGGTTATC-3′
3C-CRP primers
Upstream anchor 5′-CTGTCCCACCACTCTCTATCTGA-3′
Fragment 1 5′-GACACATGAATAGTGGCTTTGCTC-3′
Fragment 2 5′-CATCGCAAAGAGGCTAAACTC-3′
Fragment 3 5′-GGGATATAATCTCAATCTCCTGGTG-3′
Fragment 4 5′-AGCAAAAGAGCAAAGGGAGA-3′
Fragment 5 5′-CTGATGCCTACTATAATGGATG TATTTC-3′
Fragment 6 5′-ACCCAGTCCAGATTAGGTCAGG-3′
Fragment 7 5′-GGCTATCAACATTCATCTCCTCAT-3′
Downstream anchor
Fragment 8 5′-CTTAAATTCTATACGTAAGTGAGGGG AT-3′
Fragment 9 5′-CGGTCCAAAAGAATCAGAATTT GA-3′
Fragment 10 5′-GTGGAGTCTCTGAATCAGCCTTG-3′
Fragment 11 5′-GATTGACAAACAACAGAGCCTTG AC-3′
Fragment 12 5′-CTGGTCTCTAAACATGGAGTTTT CC-3′
Fragment 13 5′-AGATCCCCCATGAGTGATTTAG TG-3′
Fragment 14 5′-CCCTCTTCACTAGGTATGAAGCA AG-3′
Fragment 15 5′-CACTATCTGAGGTCATCTGAGG AG-3′
Fragment 16 5′-GCTTCTGGGAATAAAGCAGGC-3′
Fragment 17 5′-CAACAGGGAAATCCTCGAATATG-3′
3C-GAPDH primers
GAPDH 1 5′-GTTTCCATAGGACCTGCTGCG-3′
GAPDH 2 5′-GTTTTACACTGG GCACTTGAG GTC-3′
ChIP-CRP primers
Fragment 4 Forward 5′-TCTCCCTTTGCTCTTTTGCT-3′
Fragment 4 Reverse 5′-CAATAAGTTCCAATGAAATA GACA-3′
Fragment 12 Forward 5′-ATAACCTCTTTACGCCTCAGT-3′
Fragment 12 Reverse 5′-CTTCTATGCTTACAAATGGTTATC-3′
Fragment 13 Forward 5′-GGCTGATGGACTTAGGTAATACT-3′
Fragment 13 Reverse 5′-TGACCAAACTGAGCGAACTC-3′