Table 2.
Names and sequences of oligonucleotides used in this study
| Assay | Name | Sequence |
|---|---|---|
| 8-Oxoguanine incision | OG | 5′-GAA CGA CTG T(OG)A CTT GAC TGC TAC TGA T |
| 3′-CTT GCT GAC A C T GAA CTG ACG ATG ACT A | ||
| Uracil incision and BER synthesis incorporation | UU | 5′-ATA TAC CGC GG(U) CGG CCG ATC AAG CTT ATT |
| 3′-TAT ATG GCG CC G GCC GGC TAG TTC GAA TAA | ||
| AP-site incision | AP | 5′-GAA CGA CTG T (F) A CTT GAC TGC TAC TGA T |
| 3′-CTT GCT GAC A C T GAA CTG ACG ATG ACT A | ||
| Gap-filling | GAP | 5′-CTG CAG CTG ATG CGC ()GT ACG GAT CCC CGG GTA C |
| 3′-GAC GTC GAC TAC GCG GCA TGC CTA GGG GCC CAT G |
OG = 8-oxoguanine; F = tetrahydrofuran abasic site analog.