Table 1.
Proofreading and active site switching rates determined under single and multiple turnover conditions
| Reaction conditions | Proofreading rates (s−1) | Active site switching rates (s−1) |
|---|---|---|
| WT T4 DNA pol (Figure 5A)DNA: Figure 1A, single Removal of one nucleotide | 145 ± 3 | exo-to-pol: 526 |
| WT T4 DNA pol (Figure 5B)DNA: Figure 1A, multiple Removal of one nucleotide | 106 ± 10 (0.4) 11 ± 0.9 (0.6) | pol-to-exo: 11 |
| W213S-DNA polDNA: Figure 1A, multiple Removal of one nucleotide | 1.5 ± 0.1 | |
| WT T4 DNA pol (Figure 6)DNA: Figure 1D, single Removal of two nucleotides | 55 ± 2 | |
| Removal of the first nucleotide | 88.5 | exo-to-pol/ pol-to- exo: 159 |
| Removal of the second nucleotide | 145 |
Details of the reactions and the calculation of reaction rates are described in the text.