Table 4.
ESTs with TTT sites | ESTs with TAC sites | ||||||||||
RP | Is. | Name of the reverse primers (5'-3') | EMBL acc. n° of ESTs which bear the primer sequences | EMBL acc. n° of ESTs with 1 or 2 internal mutations in the primer sequences | PCR results by individual | EMBL acc. n° of ESTs which bear the primer sequences | PCR results by individual | ||||
1 | 2 | 3 | 1 | 2 | 3 | ||||||
S8 | 1 | S8-1R | CR952841, CR953486 | CR952238, CR953840 | + | + | + | CR952310, CR953241 | + | + | + |
2 | S8-2R | CR952852, CR953783 | none | + | + | + | CR952219, CR953331, CR952138, CR952189 | + | + | + | |
3 | S8-3R | CR952624, CR952678 | none | - | - | - | none | - | - | - | |
S25 | 1 | S25-1R | CR952125, CR952226, CR952356, CR952457, CR952866, CR953401, CR953717, CR953720, CR954024, CR954106 | CR952061, CR952409, CR953636 | + | + | + | CR953753 | + | + | + |
2 | S25-2R | CR954093, CR953826 | none | + | + | - | none | - | - | - | |
3 | S25-3R | none | none | - | - | - | CR953802 | - | - | + | |
L15 | 1 | L15-1R | CR953910 | none | + | + | - | none | + | - | + |
2 | L15-2R | CR952649 | none | + | - | + | none | - | - | + | |
L27a | 1 | L27a-1R | CR952520, CR952575, CR953281, CR953937 | CR952087, CR952954, CR953676 | + | + | + | CR953609 | + | + | + |
2 | L27a-2R | none | CR952757 | + | + | + | CR952635, CR953421 | + | + | + |
For all the members of these four gene families, no internal mutations in the regions bearing the putative TAC sites have been found. Abbreviations and symbols: none, no EST clone has been found in the S. cephaloptera library; RP, ribosomal protein; is., isoform; Acc. n°, EMBL accession numbers; +, PCR with positive results; -, PCR with negative results.