Table 7.
Functional annotation statistics
| A. Number of unigenes with BLAST hits | ||
| Database* | Number of unigenes | % |
| Arabidopsis | 11,724 | 70.5 |
| Cucurbitaceae | 5,340 | 32.1 |
| Uniref90 | 11,893 | 71.5 |
| Any database | 13,019 | 78.3 |
| B. Number of unigenes with HMMER hits | ||
| Database* | Number of unigenes | % |
| Pfam | 4,655 | 28.0 |
| C. Number of unigenes with orthologue | ||
| Database* | Number of unigenes | % |
| Arabidopsis | 6,673 | 40.1 |
* Databases searched were: Arabidopsis [6,109]; Uniref90 [110,115]; Cucurbitaceae: all cucurbitaceae sequences available in the National Center for Biotechnology Information (NCBI); any database: results using Arabidopsis, cucurbitaceae and Uniref90 databases all together; Pfam [49,112].