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Decoy energies versus deviation from native structure. Decoy energies as a function of the structural deviation from native for three complexes: 1AR0 (top), 1BJF (middle) and 1FBT (bottom), using the energy function with 20 amino acid classes. The native energy is shown as a large dot (lower left). The structural deviation is measured by the rms difference RMSD in Cα positions.
