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. 2007 Jul 27;8:270. doi: 10.1186/1471-2105-8-270

Table 2.

Two- and three-class energy parameters for fold recognition and dimer interface recognition. Best parameters (kcal/mol) for monomeric fold recognition (upper right) and dimer interface recognition (lower left).

H P Monomeric
-8.5 9.0 H = {ALSVTPIGMCFYW}
H -9.0 -3.5 P = {EKRHDNQ}
P 9.8 -7.1
Dimeric H P

Ha Hb P Monomeric

-4.7 -9.6 6.4 Ha = {ALSVTPIGMC}
Ha -3.8 -11.4 1.5 Hb = {FYW}
Hb -8.4 -14.3 -1.9 P = {EKRHDNQ}
P 4.8 2.4 -1.5
Dimeric Ha Hb P