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. 2007 Sep 8;8:330. doi: 10.1186/1471-2105-8-330

Table 2.

Comparison of different hybrid approaches using cross-validation for the benchmark data sets.

PS1302

Localization PSL101 PSLseq+PSL101 PSLsse+PSL101



Acc (%) MCC Acc (%) MCC Acc (%) MCC
CP 97.2 (94.8) 0.91 (0.89) 96.4 (94.4) 0.90 (0.89) 95.6 (94.4) 0.90 (0.90)
IM 94.4 (92.9) 0.95 (0.94) 93.3 (91.8) 0.95 (0.93) 93.3 (91.8) 0.94 (0.93)
PP 87.7 (88.1) 0.86 (0.84) 88.9 (88.9) 0.86 (0.85) 91.4 (91.0) 0.88 (0.88)
OM 94.3 (93.8) 0.94 (0.91) 95.5 (95.7) 0.96 (0.93) 96.3 (96.9) 0.96 (0.95)
EC 87.9 (83.2) 0.87 (0.84) 89.5 (85.8) 0.89 (0.87) 90.0 (87.9) 0.89 (0.89)

Overall 92.7 (91.2) - 93.1 (91.9) - 93.7 (92.9) -

PS1444

Localization PSL101 PSLseq+PSL101 PSLsse+PSL101



Acc (%) MCC Acc (%) MCC Acc (%) MCC

CP 96.0 (94.2) 0.91 (0.90) 94.6 (92.8) 0.89 (0.88) 95.0 (93.5) 0.91 (0.90)
IM 94.5 (92.6) 0.95 (0.94) 93.5 (91.6) 0.94 (0.93) 93.5 (91.6) 0.94 (0.93)
PP 85.1 (88.0) 0.82 (0.83) 87.0 (88.4) 0.84 (0.83) 90.2 (91.7) 0.86 (0.87)
OM 94.9 (93.9) 0.93 (0.91) 95.9 (95.7) 0.95 (0.93) 96.7 (96.4) 0.96 (0.95)
EC 82.6 (83.2) 0.83 (0.85) 87.9 (86.3) 0.87 (0.88) 87.4 (87.9) 0.87 (0.89)

Overall 91.6 (91.1) - 92.4 (91.6) - 93.2 (92.8) -

§ The performance of incorporating a three-way data split procedure is indicated in the parentheses.