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. 2007 Aug;6(6):503–516. doi: 10.1111/j.1601-183X.2006.00277.x

Table 2:

Polymerase chain reaction primers used to amplify NR2E1 sequences

Forward* Reverse


Assay Name Sequence Name Sequence
CE11A oEMS1988 5′-TACGCCTTAAATCCGAGGTC-3′ oEMS1989 5′-CGATCAAGCATGGTGTCAAG-3′
CE12A oEMS1990 5′-TGACACCGAGTCTGGAGAAA-3′ oEMS2031 5′-GTCGCCTCCATTATCTGCAC-3′
CE13A oEMS1994 5′-CAGCTCTGCTTGGGGGAAG-3′ oEMS1995 5′-AAAACGCTTTTCCCCCTCT-3′
CE14A oEMS1998 5′-TCCTTCTTGCCGTGAAATATAC-3′ oEMS2032 5′-GGAAAACTAGATTGCTGGGAAAT-3′
5′-UTRa oEMS2033 5′-CCAGGGACGCCCTATTCC-3′ oEMS2034 5′-GAGGAAGAAGGAAGAACAGCA-3′
5′-UTRb oEMS2035 5′-CCCACACTCTGCATGCCTAT-3′ oEMS2036 5′-GACAGGTGGGTGTCAGTCG-3′
Exon1 oEMS2037 5′-TGTGTCCATATCAAGCAGCA-3′ oEMS2038 5′-CTCCACGAAATGCTCCAACT-3′
CE17B oEMS2011 5′-GGAGAGCAGAGCGATGTCAC-3′ oEMS2012 5′-TCACGAGACAAGCTGGTTGA-3′
CE19B oEMS2013 5′-CCTCCCACAGCACAATCTC-3′ oEMS2016 5′-GTCCCAGACTCGTCTCAGGT-3′
Exon2 oEMS1966 5′-TTCGGTGCTAATCCCTTCAG-3′ oEMS1967 5′-AGAGGAAGGGAGAGGTCAGG-3′
Exon3 oEMS1968 5′-GGACTGGCCCTCTTGAAGTA-3′ oEMS1969 5′-TCCCAGCATCTGGAAAGAAG-3′
Exon4 oEMS1970 5′-CTCCCTCAGATTCCCTCTCC-3′ oEMS2039 5′-AACTGGGTGCGTCCCTCT-3′
Exon5 oEMS1972 5′-TACCCACCAATGTCAACTGC-3′ oEMS1973 5′-AACCCACAGGAAGAAGCAAG-3′
Exon6 oEMS1974 5′-TGGGAAAATAAGGGAAAGCTAGA-3′ oEMS1975 5′-ATTTAAATAACAATGCAAGCAGTCA-3′
Exon7 oEMS1976 5′-CTTTCATACAATATAGCCGGTTTACA-3′ oEMS1977 5′-AACATGCAGGTTCCCATAGC-3′
Exon8 oEMS1978 5′-GATTACAGACACATGCCACCAT-3′ oEMS1979 5′-CACCCACCCTGAGAGATAGG-3′
Exon9 oEMS2040 5′-TTCAAGTGTAAGACGTTAGTTTCCA-3′ oEMS2041 5′-CTGTGGCAACCCCCAGTT-3′
3′-UTRa oEMS2042 5′-AAAGCATTCCAGTAGCTATGACC-3′ oEMS2043 5′-GTTGCCTGGCCTATGGTATT-3′
3′-UTRb oEMS2044 5′-CATTATTAAGTGGCCTTCAGAACT-3′ oEMS2045 5′-CAGTTTTCGGAAAGGCATTG-3′
3′-UTRc oEMS2046 5′-CCAGACAGGAAACGAATATGG-3′ oEMS2047 5′-CCTTGTTTCTGGTGGGTGAG-3′
*

5′-TGTAAAACGACGGCCAGT-3′ sequence (-21M13F) was added to the 5′ end of each forward primer to facilitate sequencing.

5′-CAGGAAACAGCTATGAC-3′ sequence (M13R) was added to the 5′ end of each reverse primer to facilitate sequencing.