Table 2:
Forward* | Reverse† | |||
---|---|---|---|---|
Assay | Name | Sequence | Name | Sequence |
CE11A | oEMS1988 | 5′-TACGCCTTAAATCCGAGGTC-3′ | oEMS1989 | 5′-CGATCAAGCATGGTGTCAAG-3′ |
CE12A | oEMS1990 | 5′-TGACACCGAGTCTGGAGAAA-3′ | oEMS2031 | 5′-GTCGCCTCCATTATCTGCAC-3′ |
CE13A | oEMS1994 | 5′-CAGCTCTGCTTGGGGGAAG-3′ | oEMS1995 | 5′-AAAACGCTTTTCCCCCTCT-3′ |
CE14A | oEMS1998 | 5′-TCCTTCTTGCCGTGAAATATAC-3′ | oEMS2032 | 5′-GGAAAACTAGATTGCTGGGAAAT-3′ |
5′-UTRa | oEMS2033 | 5′-CCAGGGACGCCCTATTCC-3′ | oEMS2034 | 5′-GAGGAAGAAGGAAGAACAGCA-3′ |
5′-UTRb | oEMS2035 | 5′-CCCACACTCTGCATGCCTAT-3′ | oEMS2036 | 5′-GACAGGTGGGTGTCAGTCG-3′ |
Exon1 | oEMS2037 | 5′-TGTGTCCATATCAAGCAGCA-3′ | oEMS2038 | 5′-CTCCACGAAATGCTCCAACT-3′ |
CE17B | oEMS2011 | 5′-GGAGAGCAGAGCGATGTCAC-3′ | oEMS2012 | 5′-TCACGAGACAAGCTGGTTGA-3′ |
CE19B | oEMS2013 | 5′-CCTCCCACAGCACAATCTC-3′ | oEMS2016 | 5′-GTCCCAGACTCGTCTCAGGT-3′ |
Exon2 | oEMS1966 | 5′-TTCGGTGCTAATCCCTTCAG-3′ | oEMS1967 | 5′-AGAGGAAGGGAGAGGTCAGG-3′ |
Exon3 | oEMS1968 | 5′-GGACTGGCCCTCTTGAAGTA-3′ | oEMS1969 | 5′-TCCCAGCATCTGGAAAGAAG-3′ |
Exon4 | oEMS1970 | 5′-CTCCCTCAGATTCCCTCTCC-3′ | oEMS2039 | 5′-AACTGGGTGCGTCCCTCT-3′ |
Exon5 | oEMS1972 | 5′-TACCCACCAATGTCAACTGC-3′ | oEMS1973 | 5′-AACCCACAGGAAGAAGCAAG-3′ |
Exon6 | oEMS1974 | 5′-TGGGAAAATAAGGGAAAGCTAGA-3′ | oEMS1975 | 5′-ATTTAAATAACAATGCAAGCAGTCA-3′ |
Exon7 | oEMS1976 | 5′-CTTTCATACAATATAGCCGGTTTACA-3′ | oEMS1977 | 5′-AACATGCAGGTTCCCATAGC-3′ |
Exon8 | oEMS1978 | 5′-GATTACAGACACATGCCACCAT-3′ | oEMS1979 | 5′-CACCCACCCTGAGAGATAGG-3′ |
Exon9 | oEMS2040 | 5′-TTCAAGTGTAAGACGTTAGTTTCCA-3′ | oEMS2041 | 5′-CTGTGGCAACCCCCAGTT-3′ |
3′-UTRa | oEMS2042 | 5′-AAAGCATTCCAGTAGCTATGACC-3′ | oEMS2043 | 5′-GTTGCCTGGCCTATGGTATT-3′ |
3′-UTRb | oEMS2044 | 5′-CATTATTAAGTGGCCTTCAGAACT-3′ | oEMS2045 | 5′-CAGTTTTCGGAAAGGCATTG-3′ |
3′-UTRc | oEMS2046 | 5′-CCAGACAGGAAACGAATATGG-3′ | oEMS2047 | 5′-CCTTGTTTCTGGTGGGTGAG-3′ |
5′-TGTAAAACGACGGCCAGT-3′ sequence (-21M13F) was added to the 5′ end of each forward primer to facilitate sequencing.
5′-CAGGAAACAGCTATGAC-3′ sequence (M13R) was added to the 5′ end of each reverse primer to facilitate sequencing.