. Author manuscript; available in PMC: 2007 Oct 24.

Published in final edited form as: Proteomics. 2005 Aug;5(13):3454–3466. doi: 10.1002/pmic.200401333

Table 4. Summary of peptide/protein identifications using the AMT tag approach.

A summary of peptide and protein identification statistics by sample.

	High Matched Confidence Unique		All Unique		CV^a		Peptide Dynamic Range^b
	Peptide	Protein	Peptide	Protein	Mean	Median	Peptide Dynamic Range^b
B3-CIT	750	435	939	634	33.9	29.3	4585
B3-SERUM	682	379	926	633	39.7	36.4	3524
B2-CIT	792	455	1008	664	37.9	34.8	4361
B2-SERUM	713	428	915	634	38.7	35.2	3717
B1-CIT	864	441	975	572	19.0	13.5	3260
B1-SERUM	847	425	937	542	19.9	15.4	4234
RefP	860	447	1104	706	41.9	37.6	5028
RefS	787	433	1016	701	41.7	37.6	5168

Coefficient of variation was calculated from average of the ion current values of all confident protein identifications.

Dynamic range was based on the highest and lowest observed ion current values of an identified peptide.