Table 1.
Filament Assembly |
||
---|---|---|
Nucleotide Entry | % Inhibition (at 100 μM) | Kdapp (μM) |
1 | 89 ± 5 | 60 ± 30 |
2 | 82 ± 2 | 44 ± 6 |
3 | 75 ± 7 | 50 ± 30 |
4 | 65 ± 2 | 100 ± 40 |
5 | 55 ± 4 | 340 ± 190 |
6 | 32 ± 3 | ≥ 500 |
ATPase Activity |
||
Nucleotide Entry | % Inhibition (at 100 μM) | Kic (μM) |
6 | 98 ± 2 | 0.8 ± 0.1 |
2 | 34 ± 4 | 63 ± 7 |
1 | 11 ± 1 | 140 ± 50 |
3 | 7 ± 2 | 160 ± 20 |
5 | 6 ± 3 | ≥ 500 |
4 | 2 ± 2 | ≥ 500 |
Apparent dissociation constants (Kdapp) were assessed by measuring the extent of filament assembly in the FP assay over an inhibitor concentration range of 0 to 1000 μM (see Materials & Methods and Fig. 3D). ATP-competitive inhibition constants (Kic) were assessed by measuring the apparent S0.5 for ATP in the ATPase assay over an inhibitor concentration range of 0 - 1000 μM (see Materials & Methods and Fig. 5B). The identity of each nucleotide analog represented in the table is indicated by a specific numeral in the “Nucleotide Entry” column: (1) TTP (CAS# 18423-43-3); (2) N6-(1-naphthyl)ADP (see reference [15]); (3) 5-Me-UTP (CAS# 1463-10-11); (4) O6-Me-GTP (CAS# 99404-63-4); (5) 2′-O-Me-ATP (CAS# 2140-79-6); and (6) 2′-(or 3′)-O-(N-methylanthraniloyl)ATP (MANT-ATP, CAS# 85287-56-5).