TABLE 1.
Identification of proteins of N9T-4 by 2-DE
Condition of specific protein expression and protein spot no. | MM1a (kDa) | N-terminal sequenceb | Description of protein | MM2c (kDa) | Accession no. of closest protein |
---|---|---|---|---|---|
Oligotrophic | |||||
O-1 | 97 | MDTGSLTEKSREALQEAQN | Chaperone ClpB | 97.2 | YP_706636 |
MDIGKFTEKSQQALAEAQN | |||||
O-2 | 70 | ATAVGIDLGTTNX | Chaperone DnaK (HSP70) | 67.3 | P80692 |
ARAVGIDLGTTNX | |||||
O-3 | 70 | ATAVGIDLGTTNX | Chaperone DnaK (HSP70) | 67.3 | P80692 |
ARAVGIDLGTTNX | |||||
O-4 | 55 | TVYARPGTADAIMSFQSRYD | ALDH | 55.2 | AAZ14956 |
TVYARPGTADAIMSFQSRYD | |||||
O-5 | 45 | AIELNQIWDFPIWEF | MNO | 46.5 | AAB80771 |
AIELNQIWDFPIKEF | |||||
O-6 | 35 | ARDYYEVLGVP-RAARDDI | Chaperone DnaJ3 | 33.4 | Q0S1V6 |
ARDYYEVLGVSRSASQDEI | |||||
Heterotrophic | |||||
H-1 | 60 | AKITAFDEEARRQLERGLNA | Chaperonin GroEL | 56.6 | YP_702111 |
AKTIAYDEEARRGLERGLNA | |||||
H-2 | 40 | MDLFEYQAKELFAEHXV | Succinyl-CoA synthetase β-subunit | 40.8 | YP_880328 |
MDLFEYQAKELFAKHEV | |||||
H-3 | 36 | TVRVGVNGFGRIGRNFFRAV | Glyceraldehyde-3-phosphate dehydrogenase | 35.9 | YP_707099 |
TVRVGINGFGRIGRNFFRAV | (GAPDH) | ||||
H-4 | 33 | AEVLVLVEHAEGALKKVVTE | Electron transfer flavoprotein α-subunit | 32.0 | YP_706396 |
AEVLVLVEHAEGALKKVSTE | |||||
H-5 | 33 | ANYTAADVKRLRELTGSGMM | Elongation factor EF1B | 29.3 | YP_706510 |
ANYTAADVKRLRELTGSGMM | |||||
H-6 | 30 | TNIVVLIKQVPDTWSERKLTDG | Electron transfer flavoprotein β-subunit | 28.0 | YP_706395 |
TNIVVLIKQVPDTWSERKLTDG |
MM1, molecular mass obtained by the experimental data in the study.
Upper sequences, experimental data; lower sequences, N-terminal sequences retrieved from the databases.
MM2, molecular mass calculated based on the amino acid sequences on the databases.