TABLE 5.
Amino acid sequences of the colicin Ia variants detected in this study together with the human or nonhuman vertebrate sources from which the strains were isolated and whether the strains also encode microcin V
| Strain | Source | Microcin V | Varianta | Nucleotide at position:
|
|||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4 | 60 | 88 | 92 | 109 | 130 | 141 | 169 | 206 | 238 | 241 | 247 | 275 | 284 | 295 | 340 | 346 | 367 | ||||
| H190 | Human | + | 3 (1) | R | G | T | I | G | R | R | H | A | A | V | A | N | A | L | A | T | E |
| B439 | Animal | + | 6 (1) | R | G | T | M | A | R | R | H | A | A | V | A | N | A | P | A | T | E |
| B313 | Animal | + | 14 (1) | S | G | T | M | A | R | R | H | A | A | V | A | N | A | L | A | T | E |
| TA311 | Animal | + | 16 (1) | S | G | T | M | A | R | R | H | A | A | V | A | N | A | P | A | T | E |
| M550 | Animal | + | 17 (2) | S | G | T | M | A | R | R | Y | A | A | V | A | N | A | L | A | T | E |
| AE016 | Human | + | 4 (1) | R | G | T | M | A | R | R | H | A | A | V | A | N | A | L | A | T | E |
| H098 | Human | + | 5 (1) | R | G | T | M | A | R | R | H | A | A | V | A | N | A | P | A | S | E |
| H314 | Human | + | 6 (7) | R | G | T | M | A | R | R | H | A | A | V | A | N | A | P | A | T | E |
| H151 | Human | + | 14 (12) | S | G | T | M | A | R | R | H | A | A | V | A | N | A | L | A | T | E |
| H244 | Human | + | 15 (1) | S | G | T | M | A | R | R | H | A | A | V | A | N | A | P | A | S | E |
| PE002 | Human | + | 16 (1) | S | G | T | M | A | R | R | H | A | A | V | A | N | A | P | A | T | E |
| AE008 | Human | − | 13 (1) | S | G | T | M | A | R | R | H | A | A | V | A | K | A | P | A | T | E |
| CE015 | Human | − | 15 (1) | S | G | T | M | A | R | R | H | A | A | V | A | N | A | P | A | S | E |
| SE017 | Human | − | 2 (2) | R | G | A | N | G | R | R | H | A | A | V | A | N | A | P | A | S | E |
| H730 | Human | − | 10 (2) | R | G | T | N | G | R | R | H | A | A | V | A | N | A | P | A | T | E |
| H591 | Human | − | 11 (1) | R | G | T | N | G | R | R | H | A | A | V | A | N | A | P | V | S | E |
| H556 | Human | − | 18 (1) | S | G | T | N | G | R | Q | H | T | A | V | A | N | A | P | A | T | E |
| H468 | Human | − | 19 (1) | S | G | T | N | G | R | R | H | A | A | V | A | N | A | P | A | S | E |
| H422 | Human | − | 21 (1) | S | G | T | N | G | R | R | H | T | A | V | A | N | A | P | A | T | E |
| PE001 | Human | + | 7 (2) | R | G | T | N | G | R | R | H | A | A | V | A | N | A | L | A | T | E |
| H331 | Human | + | 8 (2) | R | G | T | N | G | R | R | H | A | A | V | A | N | A | P | A | S | E |
| PE004 | Human | + | 9 (1) | R | G | T | N | G | R | R | H | A | A | V | A | N | A | P | A | S | K |
| TA060 | Animal | − | 1 (2) | R | G | A | N | G | H | R | H | A | A | V | A | N | A | P | A | T | E |
| M411 | Animal | − | 8 (1) | R | G | T | N | G | R | R | H | A | A | V | A | N | A | P | A | S | E |
| TA026 | Animal | − | 10 (3) | R | G | T | N | G | R | R | H | A | A | V | A | N | A | P | A | T | E |
| R148 | Animal | − | 12 (1) | R | G | T | N | G | R | R | H | T | A | V | A | N | A | P | A | T | E |
| R529 | Animal | − | 20 (1) | S | G | T | N | G | R | R | H | T | A | I | A | N | A | P | A | T | E |
| TA261 | Animal | − | 21 (3) | S | G | T | N | G | R | R | H | T | A | V | A | N | A | P | A | T | E |
| B564 | Animal | − | 22 (1) | S | G | T | N | G | R | R | H | T | A | V | A | N | T | P | A | T | E |
| M008 | Animal | − | 23 (1) | S | G | T | N | G | R | R | H | T | A | V | S | N | A | P | A | T | E |
| M318 | Animal | − | 24 (1) | S | G | T | N | G | R | R | H | T | V | V | A | N | A | P | A | T | E |
| M028 | Animal | − | 25 (1) | S | V | T | N | G | R | R | H | T | V | V | A | N | A | P | A | T | E |
a
The number in parentheses is the number of times the variant was observed in that source population and in the presence or absence of microcin V.