TABLE 4.
Differential expression of P. putida KT2440 chromosomal genes affected by pCAR1
| ORFa | Gene namea | Change (n-fold)b | P valuec | Description of producta |
|---|---|---|---|---|
| PP0457 | rplB | 2.1 | 5.3E−03 | Ribosomal protein L2 |
| PP0789 | ampD | 2.5 | 9.6E−03 | N-acetyl-anhydromuramyl-l-alanine amidase AmpD |
| PP1149 | 5.4 | 3.7E−07 | Hypothetical protein | |
| PP2161 | 3.0 | 4.2E−05 | Hypothetical protein | |
| PP3700 | parI | 41.8 | 7.1E−05 | Hypothetical protein |
| PP4870 | 5.0 | 2.1E−02 | Azurin | |
| PP1560 | −2.0 | 3.5E−02 | Hypothetical protein | |
| PP3921 | −3.2 | 5.0E−03 | Hypothetical protein | |
| PP3991 | −5.0 | 2.1E−02 | Hypothetical protein | |
| PP4117 | −3.6 | 2.4E−02 | Hypothetical protein |
a
From the annotated genome (52) as indicated by The Institute for Genomic Research (http://www.tigr.org).
b
The values indicate the mean levels of upregulation (positive values) and downregulation (negative values) of gene expression in KT2440(pCAR1) compared to that in KT2440.
c
P values after the Bonferroni correction.