TABLE 1.
Isolates characterized in this study
| Outbreak or patient | Phage type | No. of isolates | Date of receipt | Source (no. of isolates) and geographical locationa | PFGE pattern(s)/VNTR profile(s)b (no. of isolates) |
|---|---|---|---|---|---|
| A | U288 | 7 | 21 June to 1 July 2005 | Human; northeast | STYMXB.0213/4-9-5-21-1 (1); STYMXB.0297/4-9-5-21-1 (1); STYMXB.0296/4-9-5-21-1 (1); STYMXB.0258/4-9-5-21-1 (3); STYMXB.0258/4-10-3-21-2 (1)f |
| B | DT104c | 8 | 12 to 19 October 2005 | Human; southeast | STYMXB.0061/2-7-12-13-3 (7); STYMXB.0061/2-7-12-14-3 (1) |
| C | DT104 | 71 | 19 July to 9 August 2004 | Human (57), food (14); Northern Ireland (one isolate was from northwestern England) | STYMXB.0061/2-11-11-5-3 (66); STYMXB.0061/2-11-12-5-3 (1); STYMXB.0061/2-9-11-5-3 (1); STYMXB.0061/2-7-10-4-3 (1)g; STYMXB.0245/2-11-11-5-3 (2) |
| D | DT208 | 2 | 12 November 2004 | Unknown; northeast | STYMXB.0249/2-5-6-0-2 (1); STYMXB.0250/2-5-6-0-2 (1) |
| E | DT135 | 3 | 1 to 9 September 2005 | Human; southeast | STYMXB.0236/1-8-4-21-3 (2); STYMXB.0236/1-7-4-21-3 (1) |
| F | DT15 | 7 | 17 June to 15 July 2004 | Human; southeast | STYMXB.0242/3-4-12-2-2 |
| G | DT104 | 90 | 3 to 27 August 2004 | Human (89), food (1); northeast | STYMXB.0061/2-7-10-4-3 (82); STYMXB.0061/2-7-9-4-3 (1); STYMXB.0061/2-6-10-4-3 (1); STYMXB.0061/2-12-10-4-3 (1); STYMXB.0199/2-7-10-4-3 (1); STYMXB.0245/2-7-10-4-3 (1); STYMXB.0246/2-7-10-4-3 (1); STYMXB.0294/2-7-10-4-3 (1); STYMXB.0295/2-7-10-4-3 (1) |
| H | DT94 | 2 | 8 July 2005 | Human; associated with travel to Tunisia | STYMXB.0247/2-4-5-5-3 (1); STYMXB.0248/2-4-5-5-3 (1) |
| Patient I | DT104 | 2 | 2 and 17 August 2004 | Unknown and feces | STYMXB.0234/2-7-16-0-3 |
| Patient II | DT104b | 2 | 8 and 27 July 2005 | Feces | STYMXB.0061/2-7-9-4-3 |
| Patient III | DT41 | 2 | 9 November and 2 December 2005 | Unknown and feces | STYMXB.0060/1-3-13-14-3 |
| Patient IV | RDNCd | 3 | 13 February 2004 | CSFe, feces, and blood | STYMXB.0255/2-7-0-0-1 |
| Patient V | Untypeable | 2 | 15 February 2005 | Urine and blood | STYMXB.0251/2-13-6-14-1; STYMXB.0254/2-13-6-14-1 |
| Patient VI | Unknown | 2 | 20 January 2004 | Blood and feces | STYMXB.0061/3-9-8-27-3 |
| Patient VII | DT8 | 2 | 15 March 2006 | Feces | STYMXB.0217/1-1-0-3-3 (1); STYMXB.0217/1-1-0-4-3 (1) |
In England.
The loci of the VNTR profiles are presented in the following order: STTR9-STTR5-STTR6-STTR10pl-STTR3. The number “0” in the VNTR profile represents cases with no amplification of PCR product. PFGE profiles in italics are shown in Fig. 1 and discussed in the main text.
DT, definitive phage type.
RDNC, reacts but does not conform to known patterns.
CSF, cerebrospinal fluid.
Isolate OBS-A.
Isolate OBS-C.