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. 2007 Jul 3;45(9):3089–3094. doi: 10.1128/JCM.00858-07

TABLE 1.

Predicted specificities and sensitivities of the probes for H. pylori detectiona

Probeb Type Specificity (%)c Sensitivity (%)d Fluorescence (%) Reference(s)
HP16S-1 DNA 82 82 41-60 19
Hpy-1 DNA 86 95 0-5 5a, 8a, 23, 23a
Hprobe PNA 100 25 6-20 4, 25a
Hpy769 PNA 85 89 6-20 This work
a

Estimation of binding affinity through fluorescence intensity was based on the work of Fuchs et al. (10).

b

Sequences are as follows: HP16S-1, 5′-GGA GTA TCT GGT ATT AAT CAT CG-3′; Hpy-1, 5′-CAC ACC TGA CTG ACT ATC CCG-3′; Hprobe, 5′-TAATCAGCACTCTAGCAA-3′. The sequence of Hpy769 is given in the text.

c

Calculated as (number of H. pylori strains detected by the probe)/(total number of bacterial strains detected by the probe) × 100.

d

Calculated as (number of H. pylori strains detected by the probe)/(total number of H. pylori strains in the databases) × 100.