TABLE 5.

BLASTx alignment of the nucleotide sequences of the four PCR fingerprinting major bands with serotype A and serotype D cDNA databases

Genome strain and sequence length (bp)	Protein type	Identity (%)	Supercontig or chromosomea	Code
H99b
420	Conserved hypothetical protein	100	9	CNAG_04944.1
475	NMd	NM	NM	NM
540	Conserved hypothetical protein	76	3	CNAG_01792.1
800	NM	NM	NM	NM
JEC21c
420	Expressed protein	90	4	184.m04983
475	NM	NM	NM	NM
540	DNA repair and recombination protein (PIF1)	82	3	179.m00258
800	NM	NM	NM	NM

^aSupercontig for H99 genome and chromosome for JEC21 genome.

^bBroad Institute (http://www.broad.mit.edu/).

^cTIGR (http://www.tigr.org).

^dNM, no match.