TABLE 3.
Recognition of altered peptide ligands: subject 2a
| Peptide
|
% Specific lysis by clone
|
||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Variant | Sequence | 2H1 | 9C8 | 7E6 | 1C12 | 4B4 | 9C12 | 3G5 | 2B10 | 8A10 | 9A2 | 9E1 | 1C10 | 3H12 | 6G8 | 8G3 | 8H2 |
| D1 KP9 | KPWDVIPMV | 100 | 100 | 100 | 100 | 100 | 100 | 100 | 100 | 100 | 100 | 100 | 100 | 100 | 100 | 100 | 100 |
| D2-1 | KPWDIIPMV | 91 | 0 | 101 | 100 | 181 | 101 | 94 | 101 | 14 | 97 | 94 | 84 | 87 | 57 | 26 | 76 |
| D2-2 | KPWDVVPMV | 52 | 132 | 124 | 121 | 229 | 122 | 95 | 99 | 127 | 122 | 94 | 84 | 95 | 97 | 84 | 91 |
| D2-3 | KPWDVLPMV | 100 | 102 | 85 | 8 | 184 | 120 | 87 | 89 | 96 | 3 | 11 | 93 | 62 | 97 | 94 | 10 |
| D2-4 | KPWDVLPTV | 94 | 56 | 124 | 22 | 17 | 120 | 70 | 8 | 118 | 0 | 6 | 20 | 54 | 77 | 9 | 6 |
| D3 | KPWDVVPTV | 24 | 132 | 114 | 99 | 178 | 122 | 106 | 75 | 109 | 77 | 66 | 25 | 118 | 103 | 28 | 53 |
Altered peptide ligands representing heterologous dengue viruses are differentially recognized by Den-1 NS5329-337-specific CTL clones. Bolded letters indicate the variant amino acid(s). CTL clones generated by specific stimulation with the cognate peptide KP9 were tested against a panel of altered peptide ligands representing heterologous serotypes in a 5-h 51Cr release assay. Peptides were included at a final concentration of 5 μg/ml. Results are expressed as a percentage of specific lysis induced by cognate D1 KP9 epitope peptide.