TABLE 6.
Functional classes of genes with verified or predicted cis natural S-AS pairs
| Functional class | Genes for which S-AS pairs were identifieda |
|---|---|
| DNA replication/packaging | UL27, UL52, UL70, UL72, UL89, UL102, UL112 |
| Gene expression | IRS1, TRS1 |
| Antiapoptotic | UL36, UL37, RL4 |
| Glycoproteins | UL11, UL13, UL22A, UL73, UL74, UL115, UL116, RL10, RL11 |
| Subversion of immune or antiviral defense | UL111A, IRS1/TRS1, RL11 |
| Tegument proteins | UL23, UL24, UL25, UL47, UL48, UL88 |
| Unknown | UL2, UL3, UL11, UL12, UL13, UL21, UL27, UL29, UL30, UL39, UL61, UL62, UL63, UL64, UL65, UL66, UL67, UL68, UL87, UL92, UL107, UL108, UL111, RL2, RL3, RL5, RL8, RL9, RL10, US29, US32, US33 |
a
Bold indicates sequence analysis confirmed a genuine poly(A) tail of the AS member of the pair.