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. Author manuscript; available in PMC: 2008 Jun 15.
Published in final edited form as: Neuroscience. 2007 May 23;147(1):164–173. doi: 10.1016/j.neuroscience.2007.02.063

Table 1. RT-PCR Primers Sequences.

All primers were purchased from GenoMechanix (Gainesville, Fl). RT-PCR reactions were carried out using Access RT-PCR System from Promega (Madison, WI) with the following cycle conditions: 1 cycle at 48°C for 45 min, 94°C 27 for 2 min and 72°C for 1 min, 35 cycles of PCR (94°C for 30 sec, 60°C for 1 min, 72°C for 2 min) and a final elongation period of 7 min at 72°C.

Primer name Forward sequence Fwd Tm Reverse sequence Rev Tm Product length
General
NR1 general cagaaacccctcagacaagttc 59°C cttctgtgaagcctcaaactcc 59°C 213bp
NR1 generic ccctcagacaagttcatctacgc 61°C aggttcttcctccacacgttcac 61°C 563bp
GAPDH ccttcattgacctcaactacatggtcta 63°C tagcccaggatgcccttt 55°C 720bp
Exon 5 or N1
NR1a Exon 5 (−) gcgagtctacaactggaaccac 61°C ctcgcttgcagaaaggatgatg 59°C 170bp
NR1b Exon 5 (+) 235bp
Exon 5+ inside ggaactatgaaaacctcgacc 58°C NR1b Exon 5 Reverse 59°C 158bp
N1+ (ζ1 N1+) accacttcactcccacccctgtctcctac 72°C gtccgcgcttgttgtcata 61°C 330bp
N1− (ζ1 N1−) agctcaacgccacttctgtc 61°C caccttctctgccttggactcac 65°C 407bp
Exon 21 or C1
C1 UseNR1 general Fwd or 59°C gttttgcaaagcgccgcgtcca 63°C 717bp
NR1 generic Fwd 61°C 710bp
C1+ (ζ1 C1+) tgtgtccctgtccatactcaag 60°C gtcgggctctgctctaccac 62°C 307bp
Exon 22 or C2
NR1 Exon-22 catggcaggggtcttcatgctg 63°C gaacacagctgcagctggccct 65°C 318bp
NR2
NR2A tatagagggtaaatgttgga 50°C agaaactgtgaggcatttct 52°C 322bp
NR2B actgtgacaacccacccttc 58°C cggaactggtccaggtagaa 58°C 400bp
NR2C tgtgtcaggccttagtgaca 56°C ccacactgtctccagcttct 58°C 402bp
NR2D aagaagatcgatggcgtctg 56°C ggatttcccaatggtgaagg 56°C 353bp

All primers from GenoMechanix, Gainsville, Fl, USA.