Table 1.
Global measures of the Spearman's rank correlation coefficients (ρ)
TM-score | MaxSub | GDT | Combined | |
3D-Jury† | 0.955 | 0.924 | 0.925 | 0.943 |
LEE*† | 0.943 | 0.903 | 0.909 | 0.926 |
ModFOLD | 0.843 | 0.807 | 0.807 | 0.825 |
PROQ* | 0.828 | 0.764 | 0.759 | 0.789 |
Pcons*† | 0.803 | 0.773 | 0.765 | 0.786 |
ProQ-MX | 0.779 | 0.755 | 0.751 | 0.768 |
ModSSEA | 0.744 | 0.736 | 0.742 | 0.747 |
MODCHECK | 0.729 | 0.659 | 0.658 | 0.686 |
ProQ-LG | 0.688 | 0.651 | 0.640 | 0.665 |
All models are pooled together and the ρ is measured between predicted and observed model quality scores. The combined observed model quality score was also calculated for each individual model e.g. mean score for each model (TM-score+MaxSub+GTD)/3.*The MQAP scores for these methods were downloaded from CASP7 website; all other MQAP methods were run in house during the CASP7 experiment. †MQAP methods which rely on the comparison of multiple models or include additional information from multiple servers; all other methods are capable of producing a single score based on a single model.