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. 2006 Jan 30;172(3):423–432. doi: 10.1083/jcb.200505175

Table I.

Morphometric analysis of cell extensions in 3D collagen matrices

Cell
sample
Growth factor Projected
cell area
Branch
length
Number
of branches
μm2 μm
Mock none 1,583 ± 422 57 ± 20 9.8 ± 3.3
siRNA none 941 ± 359 45 ± 19 6.3 ± 2.5
P value 0.048 0.043 0.14
Mock PDGF 2,547 ± 773 74 ± 23 12.7 ± 3.4
siRNA PDGF 1,006 ± 279 44 ± 15 8.0 ± 2.5
P value 0.003 0.0003 0.03

PAK1-silenced and mock-transfected cells were harvested and used to prepare floating collagen matrices. Samples were incubated for 4 h in DME containing 5 mg/ml BSA and 50 ng/ml PDGF, as indicated. At the end of the incubations, samples were fixed and stained with rhodamine-phalloidin for actin. For each value, measurements were made on 50 cells that were photographed at random.