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. 2007 Aug 24;73(21):6790–6801. doi: 10.1128/AEM.00841-07

TABLE 1.

Ralstonia solanacearum strains used in this study

Straina Alternate name Yr of isolation Host Originb Biovarc Phylotype/sequevar determined byd:
Plant pathogenicity tested one: Reference(s)f GenBank accession no. for:
PCR Trees egl mutS
Strains from Martinique
    CFBP2955 MT3 1984 Tomato Le Lamentin 3 I 36
    CFBP2957 RUN27 1987 Tomato Case Pilote 1 II IIA/5 34, 36 AF295265 EF371845
    CFBP2964 MA4 1983 Eggplant Schoelcher 3 I 36
    CFBP2970 MP1 1985 Capsicum sp. Fort de France 3 I 36
    CFBP2972 RUN30 1986 Potato Le Lamentin 1 II IIA/5 34, 36 AF295264 AY756807
    CFBP2976 Mb1 1987 Ensete ventricosum Le Lamentin 3 I 36
    RS25 1997 Tomato Le Lamentin II Tomato TS
    CFBP6786 SPV98-1537 1998 Tomato Fort de France II/4NPB IIB/4 TS EF371823 EF371858
    CFBP6784 ANT307 1999 Anthurium sp. Saint Joseph 1 II/4NPB IIB/4 AAA banana 35; TS EF371813 AY756742
    SPV99-1119 RUN283 1999 Anthurium sp. Morne Rouge 1 II/4NPB IIB/4 TS EF371829 EF371863
    SPV99-1541 RUN280 1999 Anthurium sp. Gros Morne 1 II/4NPB IIB/4 TS EF371822 EF371857
    CFBP6801 RUN279 2001 Heliconia caribea Gros Morne II/4NPB IIB/4 TS EF371836 EF371873
    CFBP6800 RUN281 2001 Anthurium sp. Gros Morne II/4NPB IIB/4 TS EF371825 EF371865
    SPV02-60144 RUN284 2002 Cucumber Fond Saint Denis II/4NPB IIB/4 TS EF371832 EF371867
    CFBP6795 SPV02-60152 2002 Pumpkin Saint Esprit 1 II/4NPB IIB/4 TS EF371837 EF371874
    SPV02-60037 RUN285 2002 Cantaloupe Vauclin II/4NPB IIB/4 TS EF371815 EF371850
    CFBP6797 SPV02-30308 2002 Solanum americanum Saint-Joseph II/4NPB IIB/4 TS EF371820 EF371855
    CIR02-005(1) 2002 Anthurium ferrierense Saint-Joseph II/4NPB AAB and AAA banana, Solanaceae TS
    CIR02-035 2002 Sweet pepper Marigot I Solanaceae TS
    CIR02-045 2002 Eggplant Morne des Esses I Solanaceae TS
    CFBP6783 RUN17 2002 Heliconia caribea Morne Rouge II/4NPB IIB/4 AAB and AAA banana, Solanaceae TS EF371817 EF371852
    CIR02-080 RUN18 2002 A. andreanum Morne Rouge II/4NPB IIB/4 AAB and AAA banana, Solanaceae TS EF371819 EF371854
    CFBP6782 CIR02-083 2002 Pandanus sp. Morne Rouge II/4NPB IIB/4 TS EF371827 EF371861
    CIR02-136(4) 2002 A. ferrierense Le Vauclin II AAA banana TS
    CIR02-141 2002 Tomato Ste Anne II AAA banana TS
    CIR02-204 2002 Tomato Le Lamentin II AAA banana
    CFBP6781 CIR02-142(1) 2002 Cucumber Ste Anne II/4NPB AAB and AAA banana, Solanaceae TS
    CFBP6780 RUN287 2002 Tomato Ste Anne II/4NPB IIB/4 Solanaceae TS EF371830 EF371864
    CFBP6779 RUN288 2002 Canna indica Le Lamentin II IIA AAB and AAA banana TS EF371835 EF371872
    CFBP6778 RUN289 2002 Tomato Le Lorrain II/4NPB IIB/4 Solanaceae TS EF371816 EF371851
    CFBP7012 CIR02-229(1) 2002 Pumpkin Le Marin II/4NPB IIB/4 AAB and AAA banana, Solanaceae TS EF371818 EF371853
    CFBP6777 RUN291 2002 Watermelon Basse-Pointe II/4NPB IIB/4 Solanaceae TS EF371821 EF371856
    CFBP7013 RUN292 2003 Tomato Saint-Esprit II/4NPB IIB/4 Solanaceae TS EF371824 EF371859
    CIR03-076 2003 Tomato Macouba I Tomato TS
    CIR03-077 2003 Tomato Macouba II/4NPB AAB and AAA banana, Solanaceae TS
    CFBP7017 RUN293 2003 Watermelon Macouba II/4NPB IIB/4 Solanaceae TS EF371826 EF371860
    CFBP7016 RUN294 2003 A. andreanum Gros Morne II IIA/5 TS EF371828 EF371870
    CFBP7015 RUN295 2004 Plantain Trinité II/4NPB IIB/4 TS EF371842 EF371866
    CIR04-006/16F RUN296 2004 Plantain Trinité II/4NPB IIB/4 TS EF371834 EF371862
Foreign strains
    CFBP7014 CIR06-024 2006 A. andreanum Trinidad II/4NPB IIB TS AF371831 EF371875
    IBSBF1503 RUN302 1999 Cucumis sativus Brazil II/4NPB IIB/4 TS EF371840 EF371868
    IBSBF1546 RUN298 2001 Fuchsia sp. Brazil II IIA TS EF371838 EF371877
    IBSBF1454 RUN303 1999 Cucurbita pepo Brazil II/4NPB IIB/4 TS EF371844 EF371876
    IBSBF1712 RUN299 2002 Pelargonium × hortorum Brazil II IIB TS EF371833 EF371869
    IBSBF1900 RUN301 2000 Musa sp. Brazil II/6 IIA/6 TS EF371839 EF371871
Reference strains
    GMI1000 RUN54 Tomato French Guyana I I/13 to 18 9 AF295251 AY756804
    CFBP2968 RUN58 Eggplant Guadeloupe I I/13 to 18 34 EF371806 AY756800
    JT523 RUN333 Potato Reunion Island I I/13 to 18 34 AF295252 AY756803
    CFBP765 RUN34 Tobacco Japan I I/13 to 18 34 EF371810 AY756740
    NCPPB3190 RUN78 Tomato Malaysia I I/13 to 18 34 AF295253 AY756738
    ACH92 RUN158 Ginger Australia I I/13 to 18 34 AF295254 AY756764
    R292 RUN91 Morus alba China I I/12 34 AF295255 AY756801
    ICMP7963 RUN55 Potato Kenya II IIA/7 34 AF295263 AY766776
    K60 CFBP2047 Tomato United States II IIA/7 34 AF295262 AY756799
    A3909 RUN9 Heliconia Hawaii II/6 IIA/6 34 EF371812 AY756753
    CFBP2958 RUN28 Tomato Guadeloupe II IIA/5 34 AF295266 AY756806
    IPO1609 RUN1 Potato The Netherlands II IIB/1 and 2 34 EF371814 EF371849
    JT516 RUN160 Potato Reunion Island II IIB/1 and 2 34 AF295258 AY756783
    NCPPB3987 RUN81 Potato Brazil II IIB/ND 34 AF295261 AY756785
    UW477 RUN110 Potato Peru II IIB/ND 34 AF295260 AY756821
    MOLK2 RUN74 Musa sp. Philippines II/3 IIA/3 34 EF371841 EF371848
    UW9 JT644 Heliconia Costa Rica II/3 IIA/3 34 AF295257 AY756744
    CFBP1409 JS775 Musa sp. Honduras II/3 IIB/3 34 EF371808 AY756751
    CFBP1183 JS793 Heliconia Costa Rica II/3 IIB/3 34 EF371805 AY756749
    UW70 RUN99 Musa sp. (plantain) Colombia II/4SFR IIB/4 34 DQ011550 AY756794
    UW129 Musa sp. (plantain) Peru II/4A IIB/4 34 EF371811 AY756782
    UW162 JT648 Musa sp. (plantain) Peru II/4A IIB/4 35 AF295256 AY756795
    ICMP6782 Musa sp. Brazil II/6 IIB/6 8 DQ011553 NAg
    ICMP9600 Musa sp. Brazil II/6 IIB/6 8 DQ011554 NA
    ANT307 RUN16 A. andreanum Martinique II/4NPB IIB/4 35 EF371813 AY756742
    UW21 RUN97 Musa sp. Honduras II/6 IIB/6 35 DQ011546 AY756758
    CFBP3059 RUN39 Eggplant Burkina Faso III III/19 to 23 9 AF295270 AY756766
    CFBP734 JS767 Potato Madagascar III III/19 to 23 34 AF295274 AY756746
    NCPPB332 RUN75 Potato Zimbabwe III III/19 to 23 34 AF295276 AY756760
    JT525 RUN60 Pelargonium asperum Reunion Island III III/19 to 23 34 AF295272 AY756786
    MAFF301558 RUN71 Potato Japan IV IV/10 34 DQ011558 AY756752
    PSI7 RUN83 Tomato Indonesia IV IV/10 34 EF371804 AY756732
a

CFBP, Collection Françaises de Bactéries Phytopathogènes, Angers, France; IBSBF, Coleção de Culturas de Fitobactérias do Instituto Biológico, São Paulo, Brazil.

b

Strains were all isolated in Martinique (French West Indies) except for the foreign strains and reference strains.

c

The biovars were determined in microplates by the method of French et al. (10).

d

The phylotypes and sequevars determined by PCR were those determined by the Pmx-PCR and Mmx-PCR (9, 34). The strains marked II gave no signal when tested by the Mmx-PCR. The phylotypes and sequevars determined by trees were determined by egl and mutS sequence analyses.

e

Pathogenicity was tested as described in the text on plantain banana (AAB), Cavendish banana (AAA), members of the family Solanaceae, and/or tomato genotypes only.

f

Reference numbers are given with one exception. TS, this study.

g

NA, not available.