TABLE 2.
Functional annotation of genes highly expressed in strain CLIP80459a
| Locus tag(s) | GO term identification no. | Description | P |
|---|---|---|---|
| lmo0284 lmo0448 lmo2362 | GO:0006865 | Amino acid transport | 0 |
| lmo2193 | GO:0015833 | Peptide transport | 0.04 |
| lmo2545 lmo2546 | GO:0009088 | Threonine biosynthetic process | 0 |
| lmo1522 lmo1619 | GO:0019478 | d-Amino acid catabolic process | 0 |
| lmo1221 lmo1520 lmo1660 | GO:0006418 | tRNA aminoacylation for protein translation | 0 |
| lmo1096 | GO:0004808 | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity | 0.03 |
| lmo1359 | GO:0003715 | Transcription termination factor activity | 0.03 |
| lmo1235 | GO:0004072 | Aspartate kinase activity | 0.05 |
| lmo1517 | GO:0006808 | Regulation of nitrogen utilization | 0.04 |
| lmo1516 | GO:0008519 | Ammonium transporter activity | 0.04 |
| lmo0001 | GO:0006275 | Regulation of DNA replication | 0.01 |
| lmo1885 | GO:0043101 | Purine salvage | 0.02 |
| lmo1891 lmo1942 | GO:0006310 | DNA recombination | 0.05 |
| lmo1096 lmo1238 | GO:0008033 | tRNA processing | 0.05 |
| lmo1482 | GO:0030420 | Establishment of competence for transformation | 0.03 |
| lmo1600 | GO:0016832 | Aldehyde-lyase activity | 0.04 |
| lmo1600 | GO:0004106 | Chorismate mutase activity | 0.02 |
| lmo2524 | GO:0016836 | Hydro-lyase activity | 0.05 |
| lmo1952 lmo2363 | GO:0016831 | Carboxy-lyase activity | 0 |
| lmo1072 | GO:0004736 | Pyruvate carboxylase activity | 0.02 |
| lmo1917 | GO:0008861 | Formate C-acetyltransferase activity | 0.03 |
| lmo2363 | GO:0019752 | Carboxylic acid metabolic process | 0.03 |
| lmo0482 lmo1407 lmo1661 | GO:0051539 | 4 Iron, 4 sulfur cluster binding | 0 |
a
lmo indicates locus tags of L. monocytogenes strain EGDe accessible at http://genolist.pasteur.fr/ListiList/. GO terms are accessible at http://www.geneontology.org. P indicates values of significance for GO term enrichment.