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. 2003 Nov;23(21):7887–7901. doi: 10.1128/MCB.23.21.7887-7901.2003

TABLE 2.

Characteristics of oligonucleotide probes used

Probe Sequence Location (nt)
ADH2
    5′ 5′-GTATTACGATATAGTTAATAGTTGATAGTTGATTGTATGCTTTTTGTAGCTTGATATTCTATTTA CCAAGAAGAAAC-3′ −80 to −4
    3′ 5′-GGCATACTTGATAATGAAAACTATAAATCGTAAAGACATAAG-3′ +1126 to +1167
NOT1
    5′ 5′-GCGGCCTGTTTTTCCTTTGATGTTTCTAAATTAGATGCTGTGTTCAAATCACGGGTCC-3′ +18 to +71
    3′ 5′-GGCGGATTGGTCATCTTGTTCACTGGTTGTGTATTTTTTGG-3′ +6245 to +6285
YAT1
    5′ 5′-GGCGCTCGTCCTGCAGGGGTTCCACGCGTGCCAGGTAGCGG-3′ +51 to +91
    3′ 5′-GCGGTCGATCTCCAGCAGCGACTTTTCCATGAGCGACGCAAACCGAGCAGTCTGGCG-3′ +1876 to +1932
RNA14
    5′ 5′-GGCTCTGCGACTTTGTCCGCAGAGGGATATAGTAAATCAGGAGTCGTAGAG-3′ +5 to +59
    3′ 5′-GCGCATCGAGTAAATTTGTATTAAAATATTGACGTTTTGG-3′ +1927 to +1966
CBP1
    5′ 5′-CCCTGCTGCTGTGGTTGATTCGTCGCAAGGTCCTGGTAGGTACCATTTTTATAAACCTCTCGG-3′ +32 to +94
    3′ 5′-GCCGTTCATCTTAAGTAACGTTTGACAGCCGACACACCATGC-3′ +1929 to +1970
AEP2
    5′ 5′-CGGGGATAGACAGAATGACATATTGTGCTATTCGGCAGTACACCAAATTCACGCAGCG-3′ +86 to +143
    3′ 5′-CCCCGGTTTGAAACTCCTTAAAACATCAATTCCAAGCGGG-3′ +1401 to +1440
lacZ
    5′ 5′-GGATCCGGTCATTATTAATTTAGTGTGTGTATTTGTGTTTGCGTGTCTATAGAAGTATAGTA-3′ −49 to +12
    0.5-kb 5′-GCGCTCAGGTCAAATTCAGACGGCAAACGACTGTCCTGGCC-3′ +487 to +527
    1.5-kb 5′-CGGGAAGGGCTGGTCTTCATCCACGCGCGCGTACATCGGGC-3′ +1502 to 1542
    2.3-kb 5′-CGCCAATGTCGTTATCCAGCGGTGCACGGGTGAACTGATCGC-3′ +2345 to +2386
    3′ 5′-CCGCGTGCAGCAGATGGCGATGGCTGGTTTCCATCAGTTGC-3′ +2898 to +2938