Table 1.
Top 5 of 72 TFs identified within 2 kb upstream of human intergenic miRNAs
| TransFac ID | TransFac class | Factor name | Gene ontology | P value |
|---|---|---|---|---|
| MSX1_01 | Homeobox | MSX1, HOX7: Homeobox protein MSX-1 | Skeletal development | 0.00004 |
| NCX_01 | Homeobox | TLX2, HOX11L1, NCX: T cell leukemia homeobox protein 2 | Development | 0.0047 |
| CDC5_01 | Tryptophan clusters | Cell division control protein 5 | Regulation of transcription | 0.0047 |
| SRF_01 | Mads | Serum response factor | RNA polymerase II transcription factor activity; signal transduction | 0.0264 |
| RP58_01 | Unannotated | Zinc finger protein 238 | Negative regulation of transcription from RNA polymerase II | 0.0264 |