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The relative free energies between the last minimized and MD structures. For each quadruplex, only the energetically more favorable stoichiometry or strand orientation is considered.
| Quadruplex | Relative Free Energy (kcal/mol) |
|---|---|
| G1-ammonium | 95.3 |
| G3-antiparallel | 93.0 |
| G4-antiparallel | 137.7 |
| G5-antiparallel | 119.6 |
| G6-parallel | 123.3 |
| G7-antiparallel | 165.9 |
