Table 1.
Exon/intron boundaries of the human DGKζ gene
| Exon | Length, bp | cDNA location | Splice acceptor Splice donor |
|---|---|---|---|
| 1 | Unknown | …–161 | ...TCGGGCACAG/gtgaacgggg |
| 2 | 744 | −16*–728* | ctgtgcccaa/CAGCCAACCG...CCCTGCTCGC/ctaggtatag |
| 3 | 110 | 162–271 | tcctctctag/GAAAGCCATC...GACTGGAGCG/tgagtgcctg |
| 4 | 95 | 272–366 | cgtggctaga/AGTCAGCGAC...CAGGATGCTG/gtgagtgctc |
| 5 | 75 | 367–441 | cctgcagcag/AAGTCAGTGT...GCTGGAGAAG/gtgggtgggt |
| 6 | 57 | 442–498 | atgttcacag/ATAAATTTCC...TGTCCGCGAG/gtaagtgccc |
| 7 | 69 | 499–567 | tctcccccag/CCAACCTTTG...CTGTGGGAAG/gtgagaggcc |
| 8 | 72 | 568–639 | ctaccctcag/GGATTCCAGC...CAAGCAGGCA/gtgagtggtg |
| 9 | 117 | 640–756 | ctctcctcag/TACCACAGCA...GAGGCCCCAG/gtgagtactg |
| 10 | 72 | 757–828 | tcccttgcag/AATACTCTGA...AGGGCCTGAG/gtcagcccca |
| 11 | 96 | 829–924 | tgtctcccag/GAGGGCCGCT...GGGCAACCAG/gtgaacgcgg |
| 12 | 83 | 925–1,007 | tcccatccag/GGTGCAAAGA...CCAAGGAGGC/gtaagtactt |
| 13 | 61 | 1,008–1,068 | atgagcccag/GCTGGAGATG...CGACGGCACG/gtgagcttcc |
| 14 | 114 | 1,069–1,182 | cctccccccg/GTGGGCTGGA...CTGGGGTGGG/gtaagcaccc |
| 15 | 141 | 1,183–1,323 | gctcccccag/GGCTACACAG...CACCGACCGG/gtaagttggc |
| 16 | 79 | 1,324–1,402 | ctttttccag/TTGCCCCTGG...GAGTCTCGAG/gttggcagcc |
| 17 | 56 | 1,403–1,458 | ctccacccag/AGGCCAACCC...CTACGCCGGG/gtgagtgggg |
| 18 | 63 | 1,459–1,521 | tctcccacag/ACAGCTTTCT...CCGAGTGGTG/gtgagcgggg |
| 19 | 74 | 1,522–1,595 | ccgcctccag/TGTGATGGAA...ACATCCCCAG/gtgaggaggg |
| 20 | 112 | 1,596–1,707 | gcctttcaag/GTACTGTGCG...GACGTCGTTG/gtgagtgggc |
| 21 | 200 | 1,708–1,907 | gtgcccacag/GCCGCGCTGC...TGCACAGCGA/gtacgtccca |
| 22 | 101 | 1,908–2,008 | tgcccgacag/CCAGCAGCCG...AAGGAGGCCT/gtgagtgcgg |
| 23 | 80 | 2,009–2,088 | tgttctccag/CTGTGCCGCT...ACTCCAGCAG/gtaaggggtg |
| 24 | 70 | 2,089–2,158 | ctctcaacag/GAGCCCGATG...TTCCTGGACG/gtgagtctac |
| 25 | 41 | 2,159–2,199 | tttcccacag/CCACCACTGC...CCGAGCCCAG/gtgagcgatt |
| 26 | 140 | 2,200–2,339 | ccccccacag/GAGCACCTCA...CCACGCCCCG/gtgagtcctg |
| 27 | 32 | 2,340–2,371 | tctgttgcag/GTCACTGCAA...CCCCCTCAAG/gtgaggcctc |
| 28 | 44 | 2,372–2,415 | ttccgtgcag/GTGAAGAGCT...CTTCTGTAAG/gtactagctg |
| 29 | 121 | 2,416–2,536 | ctgccctcag/CTCCAGGAGC...CTGGACCACG/gtgagccggg |
| 30 | 34 | 2,537–2,570 | ccttctccag/CCCCCCCAGA...TGGAGGAAAA/gtaagtatct |
| 31 | 100 | 2,571–2,670 | gctcccccag/CGGGGAGACC...AGACCAGCAG/gtgagcagac |
| 32 | 732 | 2,671–3,402 | cctcctccag/GGCGACACTC...Polyadenylylation |
Nucleotide sequences around the exon/intron boundaries are presented. Exon sequences are shown in uppercase letters, and intron sequences are shown in lowercase letters. The locations of the splice junctions are indicated by slashes. The first base of the ATG initiation codon is designated +1.
*
Positions in the 4.1-kb muscle cDNA.