Table 3.
Effect of RIN and probe sensitivity to RNA degradation on assay sensitivity. The percent sensitivity for a false positive rate of 10% [and 95% Confidence Interval] is reported for liver selective probe sets that significantly decrease in response to RNA degradation (LS_DEC), all liver selective probe sets (LS_ALL), and liver selective probe sets that are invariant to RNA degradation (LS_INV).
| Fold change | RIN group | LS_DEC | LS_ALL | LS_INV |
| 1.5 | 9.5 | 97.2 [85.8, 99.7] | 92.9 [88.2, 96.1] | 100 [94.0, 100] |
| 8 | 92.4 [78.7, 98.1] | 92.0 [87.5, 95.2] | 100 [93.6, 100] | |
| 7 | 72.7 [55.2, 85.9] | 88.7 [82.0, 93.4] | 100 [90.3, 100] | |
| 6 | 68.4 [51, 82.5] | 88.3 [82.9, 92.4] | 100 [84.5, 100] | |
| 2 | 9.5 | 99.2 [90.7, 100] | 96.3 [93.3, 98.1] | 100a |
| 8 | 94.3 [82.6, 98.7] | 94.7 [91.6, 96.8] | 99.9 [80.3, 100] | |
| 7 | 84.2 [68.7, 93.6] | 93.8 [89.4, 96.7] | 100 [39.5, 100] | |
| 6 | 83.6 [68.3, 93.1] | 93.3 [89.3, 96.0] | 100 [79.7, 100] | |
| 4 | 9.5 | 99.0 [89.3, 100] | 96.9 [94.5, 98.4] | 100a |
| 8 | 96.4 [85.8, 99.4] | 95.7 [93.1, 97.5] | 100a | |
| 7 | 87.8 [74.1, 95.4] | 95.3b | 100a | |
| 6 | 87.6 [74.2, 95.2] | 94.6 [91.6, 96.7] | 100a |
aNo CI (for perfect discrimination, data cannot be fitted to a ROC curve)
bValue interpolated from empirical data using Weibull cumulative discrimination function