Table 1.
Genes specifically regulated from Disordered Membrane (CD8)
| ID probe set | R-fold | Gene symbol | Functional class Gene name | |
|---|---|---|---|---|
| Growth factor | ||||
| 103520_at | 2.64 | Vegfa | Vascular endothelial growth factor A | |
| 102624_at | 2.07 | Stc2 | Stanniocalcin 2 | |
| 92578_at | 1.76 | Scye1 | Small inducible cytokine figure2dsubfamily E, member 1 | |
| Signal transduction | ||||
| 101441_i_at | 4.28 | Itpr5 | Inositol 1,4,5-triphosphate receptor 5 | |
| 102379_at | 2.47 | Rassf1 | Ras association (RalGDS/AF-6) domain family 1 | |
| 93116_at | 2.37 | Prkacb | Protein kinase, cAMP dependent, catalytic, beta | |
| 100014_at | 2.34 | Tlk2 | Tousled-like kinase 2 | |
| 97740_at | 2.18 | Dusp16 | Dual specificity phosphatase 16 | |
| 94186_at | 2.18 | Traf1 | Tnf receptor-associated factor 1 | |
| 101937_s_a | 1.72 | Clk4 | CDC like kinase 4 | |
| 94394_at | 1.63 | Rras | Harvey rat sarcoma oncogene, subgroup R | |
| 160876_at | 1.47 | Bcap29 | B-cell receptor-associated protein 29 | |
| Regulation of transcription | ||||
| 104712_at | 3.64 | Myc | Myelocytomatosis oncogene | |
| 97893_at | 2.81 | Tbpl1 | TATA box binding protein-like 1 | |
| 101902_at | 2.8 | Rbpsuh | Recombining binding protein suppressor of hairless | |
| 101995_at | 2.55 | Sqstm1 | Sequestosome 1 | |
| 160535_at | 2.42 | Nfe2l1 | Nuclear factor, erythroid derived 2,-like 1 | |
| 93697_at | 2.07 | Cbx4 | Chromobox homolog 4 | |
| (Drosophila Pc class) | ||||
| 104215_at | 1.89 | Atf6 | Activating transcription factor 6 | |
| 95521_s_at | 1.64 | Zfp68 | Zinc finger protein 68 | |
| 103006_at | 1.51 | Atf5 | Activating transcription factor 5 | |
| 101958_f_at | 0.53 | Tfdp1 | Transcription factor Dp 1 | |
| 101959_r_at | 0.53 | Tfdp1 | Transcription factor Dp 2 | |
| 100307_at | 0.51 | Nfix | Nuclear factor I/X | |
| 95791_s_at | 0.43 | Sfrs2 | Splicing factor, arginine/serine-rich 2 | |
| 99607_at | 0.39 | Skp1a | S-phase kinase-associated protein 1A | |
| DNA replication | ||||
| 104096_at | 2.37 | Orc4l | origin recognition complex subunit 4 | |
| Cell cycle | ||||
| 101429_at | 9 | Ddit3 | DNA-damage inducible transcript 3 | |
| Cytoskeleton | ||||
| 103330_at | 2.22 | Spnr | Spermatid perinuclear RNA-binding protein | |
| 101578_f_at | 0.58 | Actb | Actin, beta, cytoplasmic | |
| 160462_f_at | 0.49 | Tubb3 | Tubulin, beta 3 | |
| 100342_i_at | 0.48 | Tuba1 | Tubulin, alpha 1 | |
| Protein biosynthesis | ||||
| 104144_at | 3.34 | Gtpbp2 | GTP binding protein 2 | |
| 98936_at | 2.74 | Sars1 | Seryl-aminoacyl-tRNA synthetase 1 | |
| 93564_at | 2.69 | Yars | Tyrosyl-tRNA synthetase | |
| 93270_at | 2.55 | Gars | Glycyl-tRNA synthetase | |
| 103630_at | 2.54 | Lars | Leucyl-tRNA synthetase | |
| 96693_at | 2.5 | Rars | Arginyl-tRNA synthetase | |
| 94494_at | 2.41 | Farsl | Phenylalanine-tRNA synthetase-like, beta subunit | |
| 93752_at | 2.38 | E430001P04Rik | Isoleucine-tRNA synthetase | |
| 95054_at | 2.35 | Tars | Threonyl-tRNA synthetase | |
| 98605_at | 2.16 | Wars | Tryptophanyl-tRNA synthetase | |
| 94484_at | 1.97 | Hbs1l | Hbs1-like | |
| Protein biosynthesis | ||||
| 95159_at | 1.91 | Mrps18b | Mitochondrial ribosomal protein S18B | |
| 95067_at | 1.52 | Mrpl2 | Mitochondrial ribosomal protein L2 | |
| Proteol and peptidolysis | ||||
| 160328_at | 4.18 | Prss15 | Protease, serine, 15 | |
| 96920_at | 2.1 | Prss11 | Protease, serine, 11 (Igf binding) | |
| 98906_at | 0.41 | Fbxo9 | f-box only protein 9 | |
| Metabolism | ||||
| 161221_f_at | 3.11 | Asns | Asparagine synthetase | |
| 95738_at | 2.82 | Pycs | Pyrroline-5-carboxylate synthetase | |
| 94369_at | 2.19 | Gnpnat1 | Glucosamine-phosphate N-acetyltransferase 1 | |
| 160647_at | 2.15 | Car6 | Carbonic anhydrase 6 | |
| 104343_f_at | 2.13 | Pla2g12 | Phospholipase A2, group XIIA | |
| 97560_at | 2.01 | Psap | Prosaposin | |
| 160770_at | 0.53 | Mvd | Mevalonate (diphospho) decarboxylase | |
| 94325_at | 0.26 | Hmgcs1 | 3-hydroxy-3-methylglutaryl-Coenzyme A synthase 1 | |
| Transport | ||||
| 104221_at | 3.4 | Slc7a5 | Solute carrier family 7 (cationic amino acid transporter, y+ system), member 5 | |
| 96160_at | 2.73 | Slc6a9 | Solute carrier family 6 (neurotransmitter transporter, glycine), member 9 | |
| 92648_at | 2.24 | Stxbp3 | Syntaxin binding protein 3 | |
| 92582_at | 1.91 | Slc1a7 | Solute carrier family 1 (neutral amino acid transporter), member 5 | |
| 104706_at | 1.55 | Pex7 | Peroxisome biogenesis factor 7 | |
| Electron transport | ||||
| 92587_at | 2.17 | Fdx1 | Ferredoxin 1 | |
| 93844_at | 1.74 | Qpc-pending | Ubiquinol-cytochrome c reductase binding protein | |
| Ion transport | ||||
| 102786_at | 2.11 | Clcn3 | Chloride channel 3 | |
| 104704_at | 0.45 | Clcn4-2 | Chloride channel 4-2 | |
| Apoptosis | ||||
| 160412_at | 2.41 | Pdcd2 | Programmed cell death 2 | |
| Other | ||||
| 97914_at | 2.88 | Hspa9a | Heat shock protein, A | |
| 94643_at | 2.25 | Taa1 | Poliovirus receptor | |
| 160530_at | 2.12 | Ghitm | Growth hormone inducible transmembrane protein | |
| 104033_at | 2.1 | Mgea6 | Meningioma expressed antigen 6 | |
| 98451_at | 1.94 | Dnajb10 | DnaJ (Hsp40) homolog, subfamily B, member 10 | |
| 160230_at | 1.94 | Cox17 | Cytochrome c oxidase, subunit XVII assembly protein homolog (yeast) | |
| 97269_f_at | 1.91 | Kcp2-pending | Keratinocytes associated protein 3 | |
| 160176_at | 1.86 | Hirip5 | Histone cell cycle regulation defective interacting protein 5 | |
| 93385_at | 1.84 | Nthl1 | nth (endonuclease III)-like 1 | |
| 97268_i_at | 1.78 | Kcp2-pending | Keratinocytes associated protein 2 | |
| 101947_at | 1.77 | Nakap95-pending | A kinase (PRKA) anchor protein 8-like | |
| 160092_at | 1.71 | Ifrd1 | Interferon-related developmental regulator 1 | |
| 95109_at | 1.67 | Nol5a | Nucleolar protein 5A | |
| Other | ||||
| 97204_s_at | 1.61 | Dnajd1 | DnaJ (Hsp40) homolog, subfamily D, member 1 | |
| 94346_at | 1.61 | Wtap | Wilms’ tumour 1-associating protein | |
| 94455_at | 0.59 | Lsm3 | LSM3 homolog, U6 small nuclear RNA associated | |
| 96254_at | 0.51 | Dnajb1 | DnaJ (Hsp40) homolog, subfamily B, member 1 | |
| 103598_at | 0.46 | Dhx9 | DEAH (Asp-Glu-Ala-His) box polypeptide 9 | |
| Unknown | ||||
| 104116_at | 11.8 | D5Ertd593e | Unknown | |
| 104363_at | 2.75 | AI747712 | Unknown | |
| 103739_at | 2.68 | 1110017N23Rik | Unknown | |
| 94340_at | 2.62 | 1110004L07Rik | Unknown | |
| 95636_at | 2.34 | 0610010K14Rik | Unknown | |
| 96539_at | 2.31 | 9330147J08Rik | Unknown | |
| 104513_at | 2.28 | 2410004N09Rik | Unknown | |
| 95634_at | 2.07 | 0610010K14Rik | Unknown | |
| 103773_at | 2.27 | 1110020K19Rik | Unknown | |
| 97919_at | 2.12 | 1110021E09Rik | Unknown | |
| 160279_at | 2.01 | AA408582 | Unknown | |
| 97118_at | 1.95 | AI159700 | Unknown | |
| 98089_at | 1.88 | 1190005P17Rik | Unknown | |
| 102056_f_at | 1.83 | 2610002J02Rik | Unknown | |
| 97308_at | 1.71 | 5730466P16Rik | Unknown | |
| 94366_at | 1.7 | 2310079N02Rik | Unknown | |
| 95592_at | 1.6 | 1110019N10Rik | Unknown | |
| 103312_f_at | 1.56 | C79684 | Unknown | |
| 104045_at | 1.53 | 2610102M01Rik | Unknown | |
| 94830_at | 0.5 | 8030460C05Rik | Unknown |