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Prediction of the Ci-Hndx enhancer. (Upper) Alignment of proximal 1 kb of upstream sequence for Ci-NPP and Ci-Hndx (ci0100140298, clone ID no. GC31k05) showing conservation of clustered motifs. (Left Lower) Sequence and tentative designation of motifs is shown. (Right Lower) A typical staining pattern for the 5′ region upstream of Ci-Hndx attached to Fkh-lacZ. Note staining in the endoderm (arrowhead), trunk lateral cells (asterisk), and TVCs (arrow).
