Table 1.
Gene list of C. vulgaris C-27 chloroplast DNA
| RNA genes | ||||
| Ribosomal RNAs | ||||
| 23SrDNA* | 16SrDNA | 5SrDNA | ||
| Transfer RNAs | ||||
| trnA(UGC) | trnC(GCA) | trnD(GUC) | trnE(UUC) | trnF(GAA) |
| trnG(GCC) ×2 | trnG(UCC) | trnH(GUG) | trnI(CAU) | trnI(GAU) |
| trnK(UUU) | trnL(CAA) | trnL(GAG)† | trnL(UAA)* | trnL(UAG) |
| trnfM(CAU) | trnM(CAU) | trnN(GUU) | trnP(UGG) | trnQ(UUG) |
| trnR(ACG) | trnR(CCG) | trnR(UCU) | trnS(GGA) | trnS(GCU) |
| trnS(UGA) | trnT(GGU) | trnT(UGU) | trnV(UAC) ×2 | trnW(CCA) |
| trnY(GUA) | ||||
| Protein genes | ||||
| Photosynthesis | ||||
| Photosystem I | ||||
| psaA | psaB | psaC | psaI | psaM |
| Photosystem II | ||||
| psbA | psbB | psbC | psbD | psbE |
| psbF | psbH | psbI | psbJ | psbK |
| psbL | psbM | psbN | psbT | |
| Cytochrome | ||||
| petA | petB | petD | petG | petL |
| ATP synthase | ||||
| atpA | atpB | atpE | atpF | atpH |
| atpI | ||||
| Chlorophyll biosynthesis | ||||
| chlB | chlI† | chlL* | chlN | |
| Rubisco | ||||
| rbcL | ||||
| Ribosomal proteins | ||||
| Large subunits | ||||
| rpl2 | rpl5† | rpl12† | rpl14 | rpl16 |
| rpl19† | rpl20 | rpl23 | rpl32 | rpl36 |
| Small subunits | ||||
| rps2 | rps3 | rps4 | rps7 | rps8 |
| rps9† | rps11 | rps12 | rps14 | rps18 |
| rps19 | ||||
| Transcription/translation | ||||
| RNA polymerase | ||||
| rpoA | rpoB | rpoC1 | rpoC2 | |
| Translation factors | ||||
| infA | tufA† | |||
| Division | ||||
| minD† | (minE)† | |||
| Miscellaneous proteins | ||||
| accD | clpP | cysA | cysT | I-CvuI† |
| Conserved ORFs | ||||
| (ycf1) | (ycf2) | ycf3 | ycf4 | ycf5 |
| ycf9 | ycf10 | ycf12 | ||
Parentheses indicate genes/ORFs with limited homology. ×2, Two copies.
*
Genes containing introns.
†
Genes not found in land plants.