Table 2.
Energy* | rmsd†, Å |
---|---|
−37.7 | 0.4 |
−29.8 | 0.6 |
−22.6 | 7.6 |
−22.3 | 1.2 |
−22.2 | 0.8 |
−21.7 | 5.9 |
−21.5 | 6.8 |
−21.3 | 7.8 |
−21.3 | 6.8 |
−21.2 | 7.4 |
The GM is defined to be the set of energies for which the rmsd is less than 0.1 Å, i.e. E is in the range [−40.7; −40.3] kcal/mol.
The rmsd is calculated between the lowest-energy structure of the ligand FPR and its reference structure, which is the structure obtained after energy-minimizing the x-ray structure of the complex, human α-thrombin-FPR.