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. 2007 Aug 28;35(18):6004–6016. doi: 10.1093/nar/gkm649

Figure 3.

Figure 3.

The ϕ1 form hosts an extra stem and loop (A) The sequence of ϕ1 and ϕ17 reveals that the 5′ UTRs vary by 18 bases. The missing bases are indicated in bold and the transcription start site indicated in italics. (B) Secondary structure analysis of the UTRs by M-fold prediction software indicates the presence of an extra stem and loop structure, marked by a shaded box indicated as BoxB. BoxA and BoxC denote the structures that are common in both the RNA.