Table 1.

Different sets of primers and oligos used for assays

Figure	Primer/Oligo	Product
1A and B, 2 C, D, 5 B, C	For-AGACAAACACCACGAGAAT Rev- CGGAGTTCAGGGTGATGAGTGTGAC	SMAR1 (Predominantly ϕ1 form)
1C, 5 B, C	For- CTTCCTCTCCAAAATGCCAG Rev- AGAGATGGAAGGGGGAAAGA	Cyclin D1
1, 2, 5	For- TACCACTGGCATCGTGATGGACT Rev- TTTCTGCATCCTGTCGGCAAT	β-actin
2 E, G	For-CGGCACGAGACAAACACCA Rev-TGCAATCTGAACCACATCCGC	Composite UTR
2 F	For-AGACAAACACCACGAGAAT Rev -TTCATCATCATCTCGTCACGA	ϕ1
2 F	For-CAGCAGCCGCAGCCCACAC Rev -TTCATCATCATCTCGTCACGA	ϕ17
2 A, B	Amplicon from For-AGACAAACACCACGAGAAT Rev- CGGAGTTCAGGGTGATGAGTGTGAC cloned in PGEM-T Easy	SMAR1 (recognizes ϕ1 form predominantly)
2I	Amplicon from For-AGACAAACACCACGAGAAT Rev -TTCATCATCATCTCGTCACGA cloned in PGEM-T Easy	ϕ1 UTR
2I	Amplicon from For-CAGCAGCCGCAGCCCACAC Rev –TTCATCATCATCTCGTCACGA cloned in TOPO-TA	ϕ17 UTR
4 D–G	CGAAATTAACCCTCACTAAAGGGAACCCACGGTCGACAGAAACC	SL1
4G	CGAAATTAACCCTCACTAAAGGGAACCACACGGTCGACAGTGACC	Mutant 1
4 G	CGAAATTAACCCTCACTAAAGGGAACCACATAATCGACAGGGACC	Mutant 2
5 F, G	For-TGAAAATGAAAGAAGATGCAGTCG, Rev-GAAACTTGCACAGGGGTTGT	Probe II Cyclin D1 promoter