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. 2007 Sep 18;35(18):6297–6310. doi: 10.1093/nar/gkm536

Table 2.

ATPase, helicase, DNA binding and ATP binding activities of the wild-type and mutant BLM proteins

Helicases ATPase Helicase DNA binding ATP binding


Vm KM kcat kcat/KM A1 kobs,1 A2 kobs,2 ssDNA dsDNA [ATP]/[Protein]
µM·min−1 µM s−1 s−1·mM−1 % s−1 % s−1 nM nM
BLM642–1290 164.2 ± 9.3 80.7 ± 2.0 13.7 169.5 62.8 ± 0.6 0.52 ± 0.01 23.2 ± 0.6 0.05 ± 0.01 7.2 ± 0.4 9.8 ± 1.1 1.02 ± 0.23
Q672R 127.6 ± 11.4 1755 ± 127 10.6 6.0 16.2 ± 0.1 0.03 ± 0.01 10.9 ± 0.8 15.3 ± 1.9 0.22 ± 0.04
I841T 39.8 ± 7.4 NDa 3.3 ND 12.1 ± 1.2 14.8 ± 1.5 1.01 ± 0.15
C878R 196.5 ± 11.5 3460 ± 693 16.3 4.7 30.2 ± 0.1b 0.01 ± 0.01 168 ± 10 327 ± 27 0.97 ± 0.23
G891E 4.6 ± 0.9 ND 0.38 ND 352 ± 12 349 ± 12 0.98 ± 0.14
C901Y 5.8 ± 0.8 ND 0.48 ND 475 ± 25 122 ± 18 0.89 ± 0.27

aND: cannot be determined precisely. The ATP saturation curves of the BLM642–1290 and its corresponding variant were fitted by Michaelis–Menten, Lineweaver–Burk and Eadie–Hofstee equations. The ATP saturation curves of BLM642–1290, Q672R and C878R were fitted well by the three equations, yielding similar Vm and Km values, whatever the fitting procedure. In contrast, for poorly active mutants, I841, G891E and C901Y, the Lineweaver–Burk and Eadie–Hofstee plots were not linear. For these mutants, only the Vm values were precisely recovered by fitting with the Michaelis–Menten equation.

bData obtained with 150 nM protein.