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. 2007 Sep 24;7:172. doi: 10.1186/1471-2148-7-172

Table 1.

Editing sites in the host mitochondrial mRNA of cox1 and cob in Durinskia baltica

Site Relative to Cc or Pp DNA RNA Codon Position Change aa Conserved in
cox1 330 A G 1st I – V Pp and Cc
cox1 351 T C 1st F – L Pp and Cc
cox1 469 C U 2nd T – I Unique1
cox1 481 C U 2nd S – F Pp and Cc
cox1 495 T C 1st F – L Pp and Cc
cox1 621 A G 1st I – V Pp and Cc
cox1 691 A G 2nd Y – C Pp
cox1 924 A G 1st I – V Pp and Cc
cox1 952 T C 2nd L – S Pp and Cc
cox1 1174 A G 2nd K – R Pp and Cc
cox1 1180 A G 2nd N – S Pp and Cc
cob 782 T C 2nd V – A Pp, Cc, Pmic, Km, Pmin, Ps, At
cob 788 G C 2nd G – A Pp, Pmic, Km, Pmin, Ps, At
cob 861 C U 3rd Silent Pmic, Pmin, Km
cob 883 A G 1st I – V Pmic, Pmin, K.m.
cob 904 A G 1st T – A Pmic and Pmin
cob 1064 G C 2nd G – A Unique2
cob 1081 C U 1st H – V Unique2

Column 1 is the site numbered according to genes from Crypthecodinium cohnii (cox1) or Pfiesteria piscicida (cob). Column 2 and 3 are pre-edited and post-edited states in D. baltica. Column 4 is the position within the codon. Column 5 is the amino acid change. Column 6 lists other dinoflagellates where the same editing is found. Abbreviations: Pp, Pfiesteria piscicida; Cc, Crypthecodinium cohnii; Pmic, Prorocentrum micans; Prorocentrum minimum; Km, Karlodinium micrum; Ps, Pfiesteria shumwyae; At, Alexandrium tamarense.

1 This change is absent in Pp and Cc.

2 These changes are absent in Pp and not sampled from Cc.