Table 2.
NTRK2 single nucleotide polymorphisms (SNPs) used for genotyping.
Identification Number | ||||
---|---|---|---|---|
SNP | NCBI | Celera | Variation | Nucleotide positiona |
1* | rs1147198 | hCV7424042 | C/A | 84504902 |
2 (LNG5) | NRb | NR | A/G | 84514790 |
3 | rs1187325 | hCV3237596 | G/C | 84515149 |
4 (LNG7) | NR | NR | T/C | 84515449 |
5* | rs993315 | hCV7424005 | T/C | 84517275 |
6* | rs1187352 | hCV3237603 | A/G | 84523011 |
7* | rs1619120 | hCV7423969 | T/C | 84531750 |
8 | NR | hCV3237607 | T/C | 84533719 |
9 | NR | hCV26567668 | C/T | 84545393 |
10 | rs7041260 | hCV2121698 | C/G | 84548082 |
11* | rs1778934 | hCV2121705 | G/A | 84554176 |
12* | rs10081630 | hCV2121711 | T/A | 84558452 |
13* | rs2489162 | hCV2121715 | C/T | 84563296 |
14* | rs3780632 | hCV11868468 | C/T | 84582342 |
15* | rs7048278 | hCV25649147 | G/A | 84589707 |
16 | rs7027979 | hCV11868452 | C/G | 84610105 |
17* | rs1573219 | hCV7422086 | T/C | 84617176 |
18* | rs12555159 | hCV7958799 | A/G | 84624386 |
19 | rs1443444 | hCV7958706 | C/T | 84638865 |
20 | rs3739804 | hCV7958645 | G/A | 84651185 |
21* | rs1624327 | hCV7958636 | T/C | 84658844 |
22 | NR | hCV7958628 | C/T | 84664800 |
23* | rs1036914 | hCV7958610 | C/T | 84667713 |
24* | rs11140776 | hCV1231292 | G/T | 84676481 |
25 | rs11140777 | hCV1231291 | C/T | 84676515 |
26* | rs10868229 | hCV26567734 | G/A | 84693116 |
27* | rs1822420 | hCV11923616 | T/C | 84696830 |
28* | rs10780690 | hCV7958556 | T/G | 84707726 |
29* | rs3780634 | hCV1231360 | G/A | 84718272 |
30* | rs10780691 | hCV1231358 | C/T | 84720807 |
31 | rs11788168 | hCV1231354 | A/T | 84729983 |
32 | rs736744 | hCV1231348 | A/G | 84743961 |
33* | rs4304401 | hCV26566813 | T/C | 84760065 |
34* | rs920776 | hCV7423761 | T/C | 84767890 |
35* | rs1078947 | hCV581246 | C/T | 84792806 |
36 | rs2277192 | hCV7958330 | G/A | 84803531 |
37 | rs10746752 | hCV185062 | A/G | 84825270 |
38* | rs4504715 | hCV185068 | A/G | 84829632 |
39* | rs4242630 | hCV237788 | C/T | 84841099 |
40 | rs1565445 | hCV1935385 | C/T | 84846625 |
41* | rs1490404 | hCV1935396 | C/T | 84852084 |
42 | rs729560 | hCV946149 | G/A | 84863859 |
43* | rs1490403 | hCV1935405 | A/T | 84868060 |
HapMap NCBI Build 35.
No record in database.
In addition to our genotyping results, genotypes and allele frequency data were available for these markers from HapMap Public Release #20 for the Utah sample from the Centre d’Etude du Polymorphisme Humain collection (CEU).