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. Author manuscript; available in PMC: 2007 Nov 30.
Published in final edited form as: Virology. 2007 Aug 3;368(2):331–341. doi: 10.1016/j.virol.2007.06.042

Table 2.

Hydrogen bonds between L1 and 7D11-Fab.

From L1 To HC Distance
Residue name Atom Loop Residue name Atom CDR
Lys 33 N 1 Asp 102 O 3 2.7Å
Asp 35 Oδ1 1 Tyr 50 OH 2 2.9Å
Asp 35 Oδ1 1 Trp 33 Nε1 1 3.0Å
Asp 35 Oδ2 1 Trp 33 Nε1 1 3.3Å
Asp 35 Oδ2 1 Asn 52 N& δ2 2 3.1Å
Ala 59 O 2 Asn 52 N δ2 2 2.9Å
Asp 60 N 2 Thr 30 O 1 3.6Å
Asp 60 Oδ1 2 Ser 54 2 3.4Å
Asp 60 Oδ2 2 Arg 31 1 3.4Å
Asp 60 Oδ2 2 Thr 30 Oγ1 1 2.9Å

Listed are the atoms from L1 and their corresponding loops, the hydrogen bond partner in the heavy chain (HC) and their corresponding complementarity-determining region (CDR) loop, and the distances between them.