Table 3.
Gene-specific oligonucleotides for cloning and expression analyses of dog CEA family members
| gene | oligonucleotide name | oligonucleotide sequence | location of primers (exon) | size of PCR product (bp)* |
| CEACAM1 | cfCEACAM1-5i-f cfCEACAM1-3i-r |
5'-CGGCAGCTGCTCTCACC 5'-CCAGCAGGACAGGTTGCAT |
5'-UTR 3'-UTR |
1624 |
| CEACAM1cf-5i CEACAM1cf-3i |
5'-GTCATGAAGCTTCGGCAGCTGCTCTCACC 5'-GTCAGTTCTAGACCAGCAGGACAGGTTGCAT |
5'-UTR 3'-UTR |
1648 | |
| cfCEACAM1TM-f cfCEACAM1C3-r |
5'-AGTTCTGGCCTTCCACCTG 5'-GGATGAGGAGGCTGAAGTTG |
TM domain Cyt 3 |
270 | |
| cfCEACAM1N-f cfCEACAM1C3-r |
5'-CATCACCCTGAACGACACTG 5'-GGATGAGGAGGCTGAAGTTG |
N domain Cyt 3 |
1183 | |
| CEACAM23 | cfaCC23-N-fo cfaCC23-T-re |
5'-TCCAGAACATCACCCTGAGC 5'-GACACCCCAGGGAAGCTG |
N domain TM domain |
1008 |
| cfCEACAM1-5i-f cfaCC23-3-re |
5'-CGGCAGCTGCTCTCACC 5'-GAGCAGTACCATGGGGAAAC |
5'-UTR 3'-UTR |
1616 | |
| CEACAM24 | cfaCC24-N-fo cfaCC24-T-re |
5'-GTAGTAGACACACGAGTAATTGT 5'-CACAAGCGCTACTCCAATCA |
N domain TM domain |
258 |
| cfCEACAM1-5i-f cfaCC24-3-re |
5'-CGGCAGCTGCTCTCACC 5'-GAGGGTTCCAGGGTGAAACT |
5'-UTR 3'-UTR |
1069 | |
| CEACAM25 | cfaCC25-N-fo cfaCC25-T-re |
5'-AATCTGCCTGGGGATCTTCT 5'-AATACGCCAGGGTAGCCATG |
N domain TM domain |
352 |
| cfCEACAM1-5i-f cfaCC25-3-re |
5'-CGGCAGCTGCTCTCACC 5'-GGAAGGAGGGTTCCAAGGT |
5'-UTR 3'-UTR |
807 | |
| CEACAM28 (CEACAM30)** | cfaCC28-N-fo cfaCC28-T-re |
5'-TTTGAAACTGCACTAATACGG 5'-TTGTGTGGAGCAGGAGACA |
N domain TM domain |
703 (427) |
| cfCEACAM1-5i-f cfaCC28-3-re |
5'-CGGCAGCTGCTCTCACC 5'-GGAAGGAGAAGTGTCATGAGGT |
5'-UTR 3'-UTR |
1374 (1095) | |
| CEACAM29 | cfaCC29-N-fo cfaCC29-T-re |
5'-ACATCACCGTGAATAATGCC 5'-CGAGTGCTAGTTCGAGCAGA |
N domain TM domain |
447 |
| cfCEACAM1-5i-f cfaCC29-3-re |
5'-CGGCAGCTGCTCTCACC 5'-CAGAAGGTTACAGGGGCTCA |
5'-UTR 3'-UTR |
844 |
* Size of largest cloned or predicted (CEACAM29) splice variant is shown
** CEACAM30 cDNA were also detected using the CEACAM28 primers (size of PCR products in brackets)
Cyt, cytoplasmic domain; TM, transmembrane domain; UTR, untranslated region