Table 1.
Sequences analyzed in this study
| No. | Duplicated loci* (GenBank accession nos./other sources) | Chromosomal location† | Outgroup taxon (GenBank accession no.) |
|---|---|---|---|
| 1 | orp1, orp2 (M76684, M76685) | 4S, 10L | — |
| 2 | ant1, ant2 (X57556, X59086) | — | Rice (D12637) |
| 3 | ohp1, ohp2 (L00623, L06478) | 1L, 5S | Rice (D78609) |
| 4 | r, b (X60706, X57276) | 2S, 10L | Rice (U39860) |
| 5 | cpna, cpnb (Z12114, Z12115) | — | — |
| 6 | cdc2a, cdc2b (M60526, ref. 13) | — | Rice (X60374) |
| 7 | whp1, c2 (X60204, X60205) | 2L, 4L | Rice (X89859) |
| 8 | fer1, fer2 (X61392, X61391) | — | — |
| 9 | c1, pl1 (X52201, L13454) | 9S, 6L | Rice (X96749) |
| 10 | ibp1, ipb2 (X79085, X79086) | 9L, 1S | — |
| 11 | tbp1, tbp2 (L13301, L13302) | 1L, 5S | Wheat (Z18804) |
| 12 | vpl4a, vp14b (D. McCarty, personal communication) | 1L, 5S | — |
| 13 | obf1, obf2 (X69152, X69153) | 1S, 9L | Wheat (D12921) |
| 14 | pgpa1, pgpa2 (X15406, X15407) | — | — |
*
The names or functions of the loci are as follows: orp, orange pericarp (tryptophan synthase β subunit); ant, mitochondrial adenine nucleotide translocator; ohp, opaque2 heterodimerizing protein; r/b, basic helix–loop–helix transcriptional regulator; cpn, mitochondrial chaperonin-60; cdc2, cell division control protein 2; whp1, white pollen; c2, colorless (chalcone synthase); fer, ferritin; cl, colored aleurone; pl, purple plant (Myb-like DNA binding protein); ibp, initiator binding protein; tbp, TATA box-binding protein; bp, viviparous; obf, octopine synthase binding factor; pgpa, pseudo-glyceraldehyde-3-phosphate dehydrogenase subunit A.
†
L, the long arm of the chromosome; S, the short chromosome arm.