Skip to main content
. Author manuscript; available in PMC: 2007 Dec 10.
Published in final edited form as: Comp Biochem Physiol Part D Genomics Proteomics. 2007 Dec;2(4):257–286. doi: 10.1016/j.cbd.2007.09.001

Table 1.

EST projects among fishes.

Common Name Scientific Name No. of ESTs NCBI) No. of ESTs(Other Sources) Reference
cichlids Astatotilapia burtoni 3,670 4,000 http://hcgs.unh.edu/cichlid/#cDNA
killifish Austrofundulus limnaeus 91
goldfish Carassius auratus 2,688
common carp Cyprinus carpio 19,866
zebrafish Danio rerio 1,364,471 833,880 http://compbio.dfci.harvard.edu/tgi/cgi-bin/tgi/gimain.pl?gudb=zfish
pufferfish Takifugu rubripes 26,115 25,002 http://compbio.dfci.harvard.edu/tgi/cgi-bin/tgi/gimain.pl?gudb=fugu
killifish Fundulus heteroclitus 55,267 53,977 http://genomics.rsmas.miami.edu/funnybase/super_craw3/http://compbio.dfci.harvard.edu/tgi/cgi-bin/tgi/gimain.pl?gudb=killifish
stickleback Gasterosteus aculeatus 277,098 47,693 http://cegs.stanford.edu/stickleback_EST_sequences.jsp
long-jaw mudsucker Gillichthys mirabilis 5,107
short-jaw mudsucker Gillichthys seta 66
blue catfish Ictalurus furcatus 10,766
channel catfish Ictalurus punctatus 46,297 44,037 http://compbio.dfci.harvard.edu/tgi/cgi-bin/tgi/gimain.pl?gudb=catfish
chum salmon Oncorhynchus keta 40
rainbow trout Oncorhynchus mykiss 269,112 244,984 http://compbio.dfci.harvard.edu/tgi/cgi-bin/tgi/gimain.pl?gudb=r_trout
sockeye salmon Oncorhynchus nerka 674
chinook salmon Oncorhynchus tshawytscha 13,992
Gulf toadfish Opsanus beta 624
Nile tilapia Oreochromis niloticus 470
Japanese medaka Oryzias latipes 344,336 147,802 http://compbio.dfci.harvard.edu/tgi/cgi-bin/tgi/gimain.pl?gudb=o_latipes
flounder Platichthys flesus 8,267
guppy Poecilia reticulata 14
Atlantic salmon Salmo salar 432,888 236,009 http://compbio.dfci.harvard.edu/tgi/cgi-bin/tgi/gimain.pl?gudb=salmon
Spotted green pufferfish Tetraodon nigroviridis 314,823
swordtail Xiphophorus maculatus x Xiphophorus helleri 9
cichlids (All species) 63,000 http://hcgs.unh.edu/cichlid/#cDNA
TOTAL 2,908,861