Table 1.
EST projects among fishes.
Common Name | Scientific Name | No. of ESTs NCBI) | No. of ESTs(Other Sources) | Reference |
---|---|---|---|---|
cichlids | Astatotilapia burtoni | 3,670 | 4,000 | http://hcgs.unh.edu/cichlid/#cDNA |
killifish | Austrofundulus limnaeus | 91 | ||
goldfish | Carassius auratus | 2,688 | ||
common carp | Cyprinus carpio | 19,866 | ||
zebrafish | Danio rerio | 1,364,471 | 833,880 | http://compbio.dfci.harvard.edu/tgi/cgi-bin/tgi/gimain.pl?gudb=zfish |
pufferfish | Takifugu rubripes | 26,115 | 25,002 | http://compbio.dfci.harvard.edu/tgi/cgi-bin/tgi/gimain.pl?gudb=fugu |
killifish | Fundulus heteroclitus | 55,267 | 53,977 | http://genomics.rsmas.miami.edu/funnybase/super_craw3/http://compbio.dfci.harvard.edu/tgi/cgi-bin/tgi/gimain.pl?gudb=killifish |
stickleback | Gasterosteus aculeatus | 277,098 | 47,693 | http://cegs.stanford.edu/stickleback_EST_sequences.jsp |
long-jaw mudsucker | Gillichthys mirabilis | 5,107 | ||
short-jaw mudsucker | Gillichthys seta | 66 | ||
blue catfish | Ictalurus furcatus | 10,766 | ||
channel catfish | Ictalurus punctatus | 46,297 | 44,037 | http://compbio.dfci.harvard.edu/tgi/cgi-bin/tgi/gimain.pl?gudb=catfish |
chum salmon | Oncorhynchus keta | 40 | ||
rainbow trout | Oncorhynchus mykiss | 269,112 | 244,984 | http://compbio.dfci.harvard.edu/tgi/cgi-bin/tgi/gimain.pl?gudb=r_trout |
sockeye salmon | Oncorhynchus nerka | 674 | ||
chinook salmon | Oncorhynchus tshawytscha | 13,992 | ||
Gulf toadfish | Opsanus beta | 624 | ||
Nile tilapia | Oreochromis niloticus | 470 | ||
Japanese medaka | Oryzias latipes | 344,336 | 147,802 | http://compbio.dfci.harvard.edu/tgi/cgi-bin/tgi/gimain.pl?gudb=o_latipes |
flounder | Platichthys flesus | 8,267 | ||
guppy | Poecilia reticulata | 14 | ||
Atlantic salmon | Salmo salar | 432,888 | 236,009 | http://compbio.dfci.harvard.edu/tgi/cgi-bin/tgi/gimain.pl?gudb=salmon |
Spotted green pufferfish | Tetraodon nigroviridis | 314,823 | ||
swordtail | Xiphophorus maculatus x Xiphophorus helleri | 9 | ||
cichlids (All species) | 63,000 | http://hcgs.unh.edu/cichlid/#cDNA | ||
TOTAL | 2,908,861 |