Abstract
Soluble c-type cytochromes are central to metabolism of C1 compounds in methylotrophic bacteria. In order to characterize the role of c-type cytochromes in methane-utilizing bacteria (methanotrophs), we have purified four different cytochromes, cytochromes c-554, c-553, c-552, and c-551, from the marine methanotroph Methylomonas sp. strain A4. The two major species, cytochromes c-554 and c-552, were monoheme cytochromes and accounted for 57 and 26%, respectively, of the soluble c-heme. The approximate molecular masses were 8,500 daltons (Da) (cytochrome c-554) and 14,000 Da (cytochrome c-552), and the isoelectric points were pH 6.4 and 4.7, respectively. Two possible diheme c-type cytochromes were also isolated in lesser amounts from Methylomonas sp. strain A4, cytochromes c-551 and c-553. These were 16,500 and 34,000 Da, respectively, and had isoelectric points at pH 4.75 and 4.8, respectively. Cytochrome c-551 accounted for 9% of the soluble c-heme, and cytochrome c-553 accounted for 8%. All four cytochromes differed in their oxidized versus reduced absorption maxima and their extinction coefficients. In addition, cytochromes c-554, c-552, and c-551 were shown to have different electron paramagnetic spectra and N-terminal amino acid sequences. None of the cytochromes showed significant activity with purified methanol dehydrogenase in vitro, but our data suggested that cytochrome c-552 is probably the in vivo electron acceptor for the methanol dehydrogenase.
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Selected References
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- Alefounder P. R., Ferguson S. J. A periplasmic location for methanol dehydrogenase from Paracoccus denitrificans: implications for proton pumping by cytochrome aa3. Biochem Biophys Res Commun. 1981 Feb 12;98(3):778–784. doi: 10.1016/0006-291x(81)91179-7. [DOI] [PubMed] [Google Scholar]
- Ambler R. P., Dalton H., Meyer T. E., Bartsch R. G., Kamen M. D. The amino acid sequence of cytochrome c-555 from the methane-oxidizing bacterium Methylococcus capsulatus. Biochem J. 1986 Jan 15;233(2):333–337. doi: 10.1042/bj2330333. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Ambler R. P., Meyer T. E., Trudinger P. A., Kamen M. D. The amino acid sequence of the cytochrome c-554(547) from the chemolithotrophic bacterium Thiobacillus neapolitanus. Biochem J. 1985 May 1;227(3):1009–1013. doi: 10.1042/bj2271009. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Anderson B. L., Berry R. W., Telser A. A sodium dodecyl sulfate--polyacrylamide gel electrophoresis system that separates peptides and proteins in the molecular weight range of 2500 to 90,000. Anal Biochem. 1983 Jul 15;132(2):365–375. doi: 10.1016/0003-2697(83)90022-2. [DOI] [PubMed] [Google Scholar]
- Andersson K. K., Lipscomb J. D., Valentine M., Münck E., Hooper A. B. Tetraheme cytochrome c-554 from Nitrosomonas europaea. Heme-heme interactions and ligand binding. J Biol Chem. 1986 Jan 25;261(3):1126–1138. [PubMed] [Google Scholar]
- Anthony C. Bacterial oxidation of methane and methanol. Adv Microb Physiol. 1986;27:113–210. doi: 10.1016/s0065-2911(08)60305-7. [DOI] [PubMed] [Google Scholar]
- Brautigan D. L., Feinberg B. A., Hoffman B. M., Margoliash E., Preisach J., Blumberg W. E. Multiple low spin forms of the cytochrome c ferrihemochrome. EPR spectra of various eukaryotic and prokaryotic cytochromes c. J Biol Chem. 1977 Jan 25;252(2):574–582. [PubMed] [Google Scholar]
- Cross A. B., Anthony C. The electron-transport chains of the obligate methylotroph Methylophilus methylotrophus. Biochem J. 1980 Nov 15;192(2):429–439. doi: 10.1042/bj1920429. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Day D. J., Nunn D. N., Anthony C. Characterization of a novel soluble c-type cytochrome in a moxD mutant of Methylobacterium extorquens AM1. J Gen Microbiol. 1990 Jan;136(1):181–188. doi: 10.1099/00221287-136-1-181. [DOI] [PubMed] [Google Scholar]
- Dijkstra M., Frank J., Jr, Duine J. A. Studies on electron transfer from methanol dehydrogenase to cytochrome cL, both purified from Hyphomicrobium X. Biochem J. 1989 Jan 1;257(1):87–94. doi: 10.1042/bj2570087. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Dijkstra M., Frank J., Jr, van Wielink J. E., Duine J. A. The soluble cytochromes c of methanol-grown Hyphomicrobium X. Evidence against the involvement of autoreduction in electron-acceptor functioning of cytochrome cL. Biochem J. 1988 Apr 15;251(2):467–474. doi: 10.1042/bj2510467. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Hooper A. B., DiSpirito A. A. In bacteria which grow on simple reductants, generation of a proton gradient involves extracytoplasmic oxidation of substrate. Microbiol Rev. 1985 Jun;49(2):140–157. doi: 10.1128/mr.49.2.140-157.1985. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Kasprzak A. A., Steenkamp D. J. Localization of the major dehydrogenases in two methylotrophs by radiochemical labeling. J Bacteriol. 1983 Oct;156(1):348–353. doi: 10.1128/jb.156.1.348-353.1983. [DOI] [PMC free article] [PubMed] [Google Scholar]
- LOWRY O. H., ROSEBROUGH N. J., FARR A. L., RANDALL R. J. Protein measurement with the Folin phenol reagent. J Biol Chem. 1951 Nov;193(1):265–275. [PubMed] [Google Scholar]
- Laemmli U. K. Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature. 1970 Aug 15;227(5259):680–685. doi: 10.1038/227680a0. [DOI] [PubMed] [Google Scholar]
- Lidstrom M. E. Isolation and characterization of marine methanotrophs. Antonie Van Leeuwenhoek. 1988;54(3):189–199. doi: 10.1007/BF00443577. [DOI] [PubMed] [Google Scholar]
- Lipscomb J. D. Electron paramagnetic resonance detectable states of cytochrome P-450cam. Biochemistry. 1980 Jul 22;19(15):3590–3599. doi: 10.1021/bi00556a027. [DOI] [PubMed] [Google Scholar]
- Merle P., Kadenbach B. The subunit composition of mammalian cytochrome c oxidase. Eur J Biochem. 1980 Apr;105(3):499–507. doi: 10.1111/j.1432-1033.1980.tb04525.x. [DOI] [PubMed] [Google Scholar]
- Nunn D. N., Anthony C. The nucleotide sequence and deduced amino acid sequence of the genes for cytochrome cL and a hypothetical second subunit of the methanol dehydrogenase of Methylobacterium AM1. Nucleic Acids Res. 1988 Aug 11;16(15):7722–7722. doi: 10.1093/nar/16.15.7722. [DOI] [PMC free article] [PubMed] [Google Scholar]
- O'Farrell P. H. High resolution two-dimensional electrophoresis of proteins. J Biol Chem. 1975 May 25;250(10):4007–4021. [PMC free article] [PubMed] [Google Scholar]
- O'Keeffe D. T., Anthony C. The two cytochromes c in the facultative methylotroph Pseudomonas am1. Biochem J. 1980 Nov 15;192(2):411–419. doi: 10.1042/bj1920411. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Ohta S., Tobari J. Two cytochromes c of Methylomonas J. J Biochem. 1981 Jul;90(1):215–224. doi: 10.1093/oxfordjournals.jbchem.a133452. [DOI] [PubMed] [Google Scholar]
- Tonge G. M., Harrison D. E., Higgins I. J. Purification and properties of the methane mono-oxygenase enzyme system from Methylosinus trichosporium OB3b. Biochem J. 1977 Feb 1;161(2):333–344. doi: 10.1042/bj1610333. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Wood P. M. Why do c-type cytochromes exist? FEBS Lett. 1983 Dec 12;164(2):223–226. doi: 10.1016/0014-5793(83)80289-0. [DOI] [PubMed] [Google Scholar]