Table 5.
Predictive values for combination markers to identify each of the three clusters
Positive, no. | κ coefficient | Specificity, % | Sensitivity, % | PPV, % | NPV, % |
---|---|---|---|---|---|
CIMP 1 (BRAF-Mutation, hMLH1-Meth, Timp3-Meth, MINT1-Meth, and RIZ1-Meth) | |||||
2 of 5 | 0.80 | 95 | 86 | 83 | 96 |
3 of 5 | 0.81 | 99 | 77 | 94 | 94 |
CIMP2 (KRAS-Mutation, MINT27-Meth, MINT2-Meth, MINT31-Meth, and Megalin-Meth) | |||||
2 of 5 | 0.40 | 60 | 84 | 56 | 86 |
3 of 5 | 0.30 | 45 | 89 | 50 | 87 |
CIMP Negative (p53-Mutation, MINT27-Unmeth, MINT2-Unmeth, MINT31-Unmeth, MINT1-Unmeth) | |||||
2 of 5 | 0.55 | 61 | 100 | 62 | 100 |
3 of 5 | 0.72 | 76 | 100 | 73 | 100 |