Skip to main content
. 2007 Sep 13;8:337. doi: 10.1186/1471-2105-8-337

Table 7.

Number of proteins remaining in various locations, after removing redundant proteins, at cut-off 40%, 60% and 90% using program CD-HIT

Sequences remaining after removal of similar sequences

CD-HIT cut-off (% identity) Cytoplasmic (340*) Integral-membrane (402) Secretory (50) Membrane-attached (60)
90 223 262 34 38
60 118 195 20 29
40 117 182 17 27

* Number in bracket is total number of proteins in a location